Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 SNX5-217ENST00000606557 1087 ntBASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LSM4Q9Y4Z0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LSM4Q9Y4Z0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM4Q9Y4Z0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
LSM4Q9Y4Z0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.33■□□□□ 0.37
LSM4Q9Y4Z0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM4Q9Y4Z0 AC010542.4-201ENST00000563151 1910 ntBASIC17.33■□□□□ 0.37
LSM4Q9Y4Z0 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
LSM4Q9Y4Z0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.33■□□□□ 0.37
LSM4Q9Y4Z0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LSM4Q9Y4Z0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSM4Q9Y4Z0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSM4Q9Y4Z0 ZNRF2P3-201ENST00000424200 374 ntBASIC17.33■□□□□ 0.36
LSM4Q9Y4Z0 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LSM4Q9Y4Z0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LSM4Q9Y4Z0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSM4Q9Y4Z0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
LSM4Q9Y4Z0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.33■□□□□ 0.36
LSM4Q9Y4Z0 FAM99A-202ENST00000538190 1989 ntBASIC17.33■□□□□ 0.36
LSM4Q9Y4Z0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.33■□□□□ 0.36
LSM4Q9Y4Z0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
LSM4Q9Y4Z0 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LSM4Q9Y4Z0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 AC142381.2-201ENST00000566120 298 ntBASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LSM4Q9Y4Z0 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 UNC93B3-201ENST00000308076 687 ntBASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.31■□□□□ 0.36
LSM4Q9Y4Z0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.3■□□□□ 0.36
LSM4Q9Y4Z0 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms