Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AF131216.4-201ENST00000638924 1588 ntBASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RCL1Q9Y2P8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RCL1Q9Y2P8 LINC01960-201ENST00000563759 1884 ntBASIC17.73■□□□□ 0.43
RCL1Q9Y2P8 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RCL1Q9Y2P8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RCL1Q9Y2P8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.73■□□□□ 0.43
RCL1Q9Y2P8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RCL1Q9Y2P8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RCL1Q9Y2P8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RCL1Q9Y2P8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RCL1Q9Y2P8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RCL1Q9Y2P8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC17.73■□□□□ 0.43
RCL1Q9Y2P8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 RNF165-205ENST00000588679 2904 ntBASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RCL1Q9Y2P8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RCL1Q9Y2P8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RCL1Q9Y2P8 AC092667.1-201ENST00000434301 2586 ntBASIC17.71■□□□□ 0.43
RCL1Q9Y2P8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RCL1Q9Y2P8 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RCL1Q9Y2P8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RCL1Q9Y2P8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
RCL1Q9Y2P8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RCL1Q9Y2P8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.71■□□□□ 0.43
RCL1Q9Y2P8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.71■□□□□ 0.43
RCL1Q9Y2P8 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RCL1Q9Y2P8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 AC022616.5-201ENST00000518796 181 ntBASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 AL157384.1-201ENST00000445995 2473 ntBASIC17.7■□□□□ 0.42
RCL1Q9Y2P8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 Z98882.1-201ENST00000622160 2253 ntBASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 AF106564.1-201ENST00000607058 2553 ntBASIC17.69■□□□□ 0.42
RCL1Q9Y2P8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RCL1Q9Y2P8 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RCL1Q9Y2P8 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms