Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
SATB2Q9UPW6 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
SATB2Q9UPW6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SATB2Q9UPW6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SATB2Q9UPW6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SATB2Q9UPW6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.19■□□□□ 0.98
SATB2Q9UPW6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SATB2Q9UPW6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SATB2Q9UPW6 AC080038.1-201ENST00000611274 1154 ntBASIC21.19■□□□□ 0.98
SATB2Q9UPW6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SATB2Q9UPW6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.19■□□□□ 0.98
SATB2Q9UPW6 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
SATB2Q9UPW6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SATB2Q9UPW6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.18■□□□□ 0.98
SATB2Q9UPW6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.18■□□□□ 0.98
SATB2Q9UPW6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SATB2Q9UPW6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SATB2Q9UPW6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.18■□□□□ 0.98
SATB2Q9UPW6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SATB2Q9UPW6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SATB2Q9UPW6 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.18■□□□□ 0.98
SATB2Q9UPW6 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SATB2Q9UPW6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SATB2Q9UPW6 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 AC016769.1-201ENST00000409132 1010 ntBASIC21.17■□□□□ 0.98
SATB2Q9UPW6 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SATB2Q9UPW6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 AC137761.2-201ENST00000561729 223 ntBASIC21.16■□□□□ 0.98
SATB2Q9UPW6 AC145350.3-201ENST00000569033 163 ntBASIC21.16■□□□□ 0.98
SATB2Q9UPW6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SATB2Q9UPW6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 AC006015.1-201ENST00000429970 570 ntBASIC21.15■□□□□ 0.98
SATB2Q9UPW6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 KRT18P61-201ENST00000585825 1298 ntBASIC21.15■□□□□ 0.98
SATB2Q9UPW6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 LINC01529-204ENST00000636474 1715 ntBASIC21.15■□□□□ 0.98
SATB2Q9UPW6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SATB2Q9UPW6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms