Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LHX6Q9UPM6 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LHX6Q9UPM6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LHX6Q9UPM6 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LHX6Q9UPM6 AC093323.1-202ENST00000635031 2045 ntBASIC20.55■□□□□ 0.88
LHX6Q9UPM6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LHX6Q9UPM6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LHX6Q9UPM6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
LHX6Q9UPM6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LHX6Q9UPM6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LHX6Q9UPM6 ALDH1A3-203ENST00000557963 1670 ntBASIC20.54■□□□□ 0.88
LHX6Q9UPM6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 ESRRAP1-201ENST00000400596 1257 ntBASIC20.54■□□□□ 0.88
LHX6Q9UPM6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 AC073912.3-201ENST00000624414 853 ntBASIC20.54■□□□□ 0.88
LHX6Q9UPM6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.54■□□□□ 0.88
LHX6Q9UPM6 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LHX6Q9UPM6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
LHX6Q9UPM6 BX005040.4-201ENST00000637145 1518 ntBASIC20.53■□□□□ 0.88
LHX6Q9UPM6 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LHX6Q9UPM6 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LHX6Q9UPM6 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LHX6Q9UPM6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LHX6Q9UPM6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LHX6Q9UPM6 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
LHX6Q9UPM6 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.53■□□□□ 0.88
LHX6Q9UPM6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LHX6Q9UPM6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LHX6Q9UPM6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LHX6Q9UPM6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LHX6Q9UPM6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LHX6Q9UPM6 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
LHX6Q9UPM6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LHX6Q9UPM6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LHX6Q9UPM6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
LHX6Q9UPM6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.51■□□□□ 0.87
LHX6Q9UPM6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LHX6Q9UPM6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.51■□□□□ 0.87
LHX6Q9UPM6 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
LHX6Q9UPM6 AC133552.2-202ENST00000575694 574 ntBASIC20.51■□□□□ 0.87
LHX6Q9UPM6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
LHX6Q9UPM6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.51■□□□□ 0.87
LHX6Q9UPM6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LHX6Q9UPM6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
LHX6Q9UPM6 AC020928.2-201ENST00000588717 2197 ntBASIC20.51■□□□□ 0.87
LHX6Q9UPM6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
LHX6Q9UPM6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LHX6Q9UPM6 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.5■□□□□ 0.87
LHX6Q9UPM6 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.5■□□□□ 0.87
LHX6Q9UPM6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.5■□□□□ 0.87
LHX6Q9UPM6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
LHX6Q9UPM6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
LHX6Q9UPM6 AC079140.4-201ENST00000507448 529 ntBASIC20.5■□□□□ 0.87
LHX6Q9UPM6 AC008550.1-201ENST00000511500 884 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms