Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA9Q9UGM1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA9Q9UGM1 AC135279.3-201ENST00000610945 1311 ntBASIC19.84■□□□□ 0.77
CHRNA9Q9UGM1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA9Q9UGM1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
CHRNA9Q9UGM1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.84■□□□□ 0.77
CHRNA9Q9UGM1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
CHRNA9Q9UGM1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA9Q9UGM1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA9Q9UGM1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA9Q9UGM1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA9Q9UGM1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHRNA9Q9UGM1 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA9Q9UGM1 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHRNA9Q9UGM1 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA9Q9UGM1 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.83■□□□□ 0.77
CHRNA9Q9UGM1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CHRNA9Q9UGM1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA9Q9UGM1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CHRNA9Q9UGM1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHRNA9Q9UGM1 AC024257.2-201ENST00000549699 147 ntBASIC19.83■□□□□ 0.77
CHRNA9Q9UGM1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHRNA9Q9UGM1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA9Q9UGM1 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA9Q9UGM1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
CHRNA9Q9UGM1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHRNA9Q9UGM1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CHRNA9Q9UGM1 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA9Q9UGM1 MIR4767-201ENST00000582827 78 ntBASIC19.82■□□□□ 0.76
CHRNA9Q9UGM1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.82■□□□□ 0.76
CHRNA9Q9UGM1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.82■□□□□ 0.76
CHRNA9Q9UGM1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA9Q9UGM1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.82■□□□□ 0.76
CHRNA9Q9UGM1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHRNA9Q9UGM1 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CHRNA9Q9UGM1 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 C11orf96-202ENST00000528572 1834 ntBASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 AL031602.1-201ENST00000633169 911 ntBASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHRNA9Q9UGM1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 PBX2P1-201ENST00000493219 1291 ntBASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CHRNA9Q9UGM1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
CHRNA9Q9UGM1 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms