Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 AC016769.1-201ENST00000409132 1010 ntBASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 AC137761.2-201ENST00000561729 223 ntBASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 AC145350.3-201ENST00000569033 163 ntBASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 AC004854.2-201ENST00000608450 1441 ntBASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LRIT1Q9P2V4 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LRIT1Q9P2V4 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRIT1Q9P2V4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
LRIT1Q9P2V4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
LRIT1Q9P2V4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.09■□□□□ 0.97
LRIT1Q9P2V4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LRIT1Q9P2V4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRIT1Q9P2V4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRIT1Q9P2V4 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRIT1Q9P2V4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRIT1Q9P2V4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRIT1Q9P2V4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.08■□□□□ 0.97
LRIT1Q9P2V4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.08■□□□□ 0.96
LRIT1Q9P2V4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LRIT1Q9P2V4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LRIT1Q9P2V4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.08■□□□□ 0.96
LRIT1Q9P2V4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRIT1Q9P2V4 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRIT1Q9P2V4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 AC006015.1-201ENST00000429970 570 ntBASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.07■□□□□ 0.96
LRIT1Q9P2V4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRIT1Q9P2V4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LRIT1Q9P2V4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.06■□□□□ 0.96
LRIT1Q9P2V4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.06■□□□□ 0.96
LRIT1Q9P2V4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.06■□□□□ 0.96
LRIT1Q9P2V4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.06■□□□□ 0.96
LRIT1Q9P2V4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
LRIT1Q9P2V4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.06■□□□□ 0.96
LRIT1Q9P2V4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.06■□□□□ 0.96
LRIT1Q9P2V4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRIT1Q9P2V4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
LRIT1Q9P2V4 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRIT1Q9P2V4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 KRT19P1-201ENST00000405746 1186 ntBASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 AC079140.4-201ENST00000507448 529 ntBASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
LRIT1Q9P2V4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
LRIT1Q9P2V4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LRIT1Q9P2V4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
LRIT1Q9P2V4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRIT1Q9P2V4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.04■□□□□ 0.96
LRIT1Q9P2V4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRIT1Q9P2V4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.04■□□□□ 0.96
LRIT1Q9P2V4 AC080038.1-201ENST00000611274 1154 ntBASIC21.04■□□□□ 0.96
LRIT1Q9P2V4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.04■□□□□ 0.96
LRIT1Q9P2V4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRIT1Q9P2V4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
LRIT1Q9P2V4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIT1Q9P2V4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIT1Q9P2V4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIT1Q9P2V4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LRIT1Q9P2V4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LRIT1Q9P2V4 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.03■□□□□ 0.96
LRIT1Q9P2V4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.03■□□□□ 0.96
LRIT1Q9P2V4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.03■□□□□ 0.96
LRIT1Q9P2V4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
LRIT1Q9P2V4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.03■□□□□ 0.96
LRIT1Q9P2V4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms