Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MKS1Q9NXB0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.52■■□□□ 1.04
MKS1Q9NXB0 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.52■■□□□ 1.04
MKS1Q9NXB0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MKS1Q9NXB0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.52■■□□□ 1.04
MKS1Q9NXB0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MKS1Q9NXB0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.52■■□□□ 1.04
MKS1Q9NXB0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MKS1Q9NXB0 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.03
MKS1Q9NXB0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
MKS1Q9NXB0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MKS1Q9NXB0 FEM1AP4-201ENST00000443167 1987 ntBASIC21.5■■□□□ 1.03
MKS1Q9NXB0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 KRT8P33-201ENST00000508125 1423 ntBASIC21.5■■□□□ 1.03
MKS1Q9NXB0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 AC012354.3-201ENST00000623734 483 ntBASIC21.5■■□□□ 1.03
MKS1Q9NXB0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MKS1Q9NXB0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MKS1Q9NXB0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.49■■□□□ 1.03
MKS1Q9NXB0 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MKS1Q9NXB0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
MKS1Q9NXB0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.49■■□□□ 1.03
MKS1Q9NXB0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
MKS1Q9NXB0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
MKS1Q9NXB0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.49■■□□□ 1.03
MKS1Q9NXB0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
MKS1Q9NXB0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
MKS1Q9NXB0 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 BX664725.1-201ENST00000438252 379 ntBASIC21.48■■□□□ 1.03
MKS1Q9NXB0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.48■■□□□ 1.03
MKS1Q9NXB0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MKS1Q9NXB0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MKS1Q9NXB0 AL031602.1-201ENST00000633169 911 ntBASIC21.47■■□□□ 1.03
MKS1Q9NXB0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
MKS1Q9NXB0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MKS1Q9NXB0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MKS1Q9NXB0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
MKS1Q9NXB0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
MKS1Q9NXB0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
MKS1Q9NXB0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
MKS1Q9NXB0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MKS1Q9NXB0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.45■■□□□ 1.02
MKS1Q9NXB0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MKS1Q9NXB0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
MKS1Q9NXB0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms