Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 PVT1_1.1-201ENST00000615125 194 ntBASIC19.79■□□□□ 0.76
CLN6Q9NWW5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.79■□□□□ 0.76
CLN6Q9NWW5 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 FP325331.1-202ENST00000623531 1380 ntBASIC19.78■□□□□ 0.76
CLN6Q9NWW5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLN6Q9NWW5 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLN6Q9NWW5 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.77■□□□□ 0.76
CLN6Q9NWW5 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.77■□□□□ 0.76
CLN6Q9NWW5 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLN6Q9NWW5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLN6Q9NWW5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.77■□□□□ 0.76
CLN6Q9NWW5 ATP5G2P3-201ENST00000429083 425 ntBASIC19.77■□□□□ 0.76
CLN6Q9NWW5 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLN6Q9NWW5 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLN6Q9NWW5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLN6Q9NWW5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
CLN6Q9NWW5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CLN6Q9NWW5 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.77■□□□□ 0.75
CLN6Q9NWW5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CLN6Q9NWW5 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 AC004987.1-201ENST00000428627 508 ntBASIC19.76■□□□□ 0.75
CLN6Q9NWW5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.76■□□□□ 0.75
CLN6Q9NWW5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLN6Q9NWW5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CLN6Q9NWW5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.74■□□□□ 0.75
CLN6Q9NWW5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.74■□□□□ 0.75
CLN6Q9NWW5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLN6Q9NWW5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLN6Q9NWW5 AC009086.3-201ENST00000623486 1008 ntBASIC19.74■□□□□ 0.75
CLN6Q9NWW5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLN6Q9NWW5 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLN6Q9NWW5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CLN6Q9NWW5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CLN6Q9NWW5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CLN6Q9NWW5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CLN6Q9NWW5 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLN6Q9NWW5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CLN6Q9NWW5 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CLN6Q9NWW5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.73■□□□□ 0.75
CLN6Q9NWW5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CLN6Q9NWW5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms