Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 AC010864.1-201ENST00000609407 1511 ntBASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CDC42SE1Q9NRR8 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CDC42SE1Q9NRR8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
CDC42SE1Q9NRR8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CDC42SE1Q9NRR8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CDC42SE1Q9NRR8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
CDC42SE1Q9NRR8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.27□□□□□ -0.6
CDC42SE1Q9NRR8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
CDC42SE1Q9NRR8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CDC42SE1Q9NRR8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC11.27□□□□□ -0.6
CDC42SE1Q9NRR8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CDC42SE1Q9NRR8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 AC080038.3-201ENST00000623346 1952 ntBASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 AC106820.2-201ENST00000563775 3264 ntBASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CDC42SE1Q9NRR8 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 ESRRAP2-201ENST00000418437 1549 ntBASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 LINC01006-201ENST00000333319 2292 ntBASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CDC42SE1Q9NRR8 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms