Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF556Q9HAH1 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF556Q9HAH1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
ZNF556Q9HAH1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF556Q9HAH1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ZNF556Q9HAH1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF556Q9HAH1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
ZNF556Q9HAH1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ZNF556Q9HAH1 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ZNF556Q9HAH1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF556Q9HAH1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.07■□□□□ 0.8
ZNF556Q9HAH1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF556Q9HAH1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ZNF556Q9HAH1 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZNF556Q9HAH1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ZNF556Q9HAH1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
ZNF556Q9HAH1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ZNF556Q9HAH1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 AL121603.2-201ENST00000557373 2117 ntBASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 HSD17B1P1-201ENST00000590052 955 ntBASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.06■□□□□ 0.8
ZNF556Q9HAH1 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZNF556Q9HAH1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF556Q9HAH1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ZNF556Q9HAH1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF556Q9HAH1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF556Q9HAH1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF556Q9HAH1 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF556Q9HAH1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF556Q9HAH1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF556Q9HAH1 NTF6A-201ENST00000591175 560 ntBASIC20.04■□□□□ 0.8
ZNF556Q9HAH1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZNF556Q9HAH1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.04■□□□□ 0.8
ZNF556Q9HAH1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.04■□□□□ 0.8
ZNF556Q9HAH1 AC005703.6-201ENST00000623265 1329 ntBASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 PVT1_1.1-201ENST00000615125 194 ntBASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ZNF556Q9HAH1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 ABHD17AP5-201ENST00000580133 923 ntBASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 AC010980.1-201ENST00000587192 1142 ntBASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 AC244015.2-201ENST00000616358 1861 ntBASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ZNF556Q9HAH1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF556Q9HAH1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF556Q9HAH1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ZNF556Q9HAH1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.02■□□□□ 0.79
ZNF556Q9HAH1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms