Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 CLDN5-201ENST00000403084 2357 ntBASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
LRRC40Q9H9A6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.1■■□□□ 1.13
LRRC40Q9H9A6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRRC40Q9H9A6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRRC40Q9H9A6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRRC40Q9H9A6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRRC40Q9H9A6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.1■■□□□ 1.13
LRRC40Q9H9A6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LRRC40Q9H9A6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRRC40Q9H9A6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.1■■□□□ 1.13
LRRC40Q9H9A6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LRRC40Q9H9A6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRRC40Q9H9A6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRC40Q9H9A6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRC40Q9H9A6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRC40Q9H9A6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
LRRC40Q9H9A6 SERBP1P1-201ENST00000396021 1160 ntBASIC22.09■■□□□ 1.13
LRRC40Q9H9A6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.09■■□□□ 1.13
LRRC40Q9H9A6 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.09■■□□□ 1.13
LRRC40Q9H9A6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRC40Q9H9A6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.09■■□□□ 1.13
LRRC40Q9H9A6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRRC40Q9H9A6 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRC40Q9H9A6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 AC068587.7-201ENST00000641602 218 ntBASIC22.08■■□□□ 1.13
LRRC40Q9H9A6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.08■■□□□ 1.12
LRRC40Q9H9A6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
LRRC40Q9H9A6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
LRRC40Q9H9A6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 AC011298.3-201ENST00000615796 283 ntBASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 WWC2-AS2-201ENST00000578387 2183 ntBASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRRC40Q9H9A6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 AL136116.3-201ENST00000402907 1138 ntBASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 AC136469.2-201ENST00000623944 1028 ntBASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRC40Q9H9A6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRRC40Q9H9A6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
LRRC40Q9H9A6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRRC40Q9H9A6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRRC40Q9H9A6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
LRRC40Q9H9A6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRRC40Q9H9A6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRRC40Q9H9A6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRRC40Q9H9A6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms