Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 AC010997.5-201ENST00000609182 354 ntBASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PPP1R3EQ9H7J1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP1R3EQ9H7J1 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP1R3EQ9H7J1 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.22■□□□□ 0.67
PPP1R3EQ9H7J1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.22■□□□□ 0.67
PPP1R3EQ9H7J1 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.22■□□□□ 0.67
PPP1R3EQ9H7J1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP1R3EQ9H7J1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PPP1R3EQ9H7J1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
PPP1R3EQ9H7J1 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PPP1R3EQ9H7J1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP1R3EQ9H7J1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PPP1R3EQ9H7J1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PPP1R3EQ9H7J1 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.2■□□□□ 0.66
PPP1R3EQ9H7J1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP1R3EQ9H7J1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PPP1R3EQ9H7J1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.2■□□□□ 0.66
PPP1R3EQ9H7J1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.2■□□□□ 0.66
PPP1R3EQ9H7J1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.2■□□□□ 0.66
PPP1R3EQ9H7J1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
PPP1R3EQ9H7J1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP1R3EQ9H7J1 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PPP1R3EQ9H7J1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.2■□□□□ 0.66
PPP1R3EQ9H7J1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PPP1R3EQ9H7J1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP1R3EQ9H7J1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP1R3EQ9H7J1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PPP1R3EQ9H7J1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PPP1R3EQ9H7J1 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.19■□□□□ 0.66
PPP1R3EQ9H7J1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PPP1R3EQ9H7J1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PPP1R3EQ9H7J1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
PPP1R3EQ9H7J1 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.19■□□□□ 0.66
PPP1R3EQ9H7J1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PPP1R3EQ9H7J1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
PPP1R3EQ9H7J1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.17■□□□□ 0.66
PPP1R3EQ9H7J1 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 AC009102.2-201ENST00000606772 1639 ntBASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 AC144652.1-201ENST00000609974 1624 ntBASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PPP1R3EQ9H7J1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms