Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC25.7■■□□□ 1.7
RNF41Q9H4P4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RNF41Q9H4P4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RNF41Q9H4P4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RNF41Q9H4P4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RNF41Q9H4P4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RNF41Q9H4P4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.7■■□□□ 1.7
RNF41Q9H4P4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
RNF41Q9H4P4 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.69■■□□□ 1.7
RNF41Q9H4P4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.69■■□□□ 1.7
RNF41Q9H4P4 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF41Q9H4P4 NME4-202ENST00000382940 766 ntTSL 3 BASIC25.69■■□□□ 1.7
RNF41Q9H4P4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.69■■□□□ 1.7
RNF41Q9H4P4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF41Q9H4P4 AC012414.1-201ENST00000556676 535 ntBASIC25.69■■□□□ 1.7
RNF41Q9H4P4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.69■■□□□ 1.7
RNF41Q9H4P4 NME4-211ENST00000620944 1193 ntTSL 2 BASIC25.69■■□□□ 1.7
RNF41Q9H4P4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RNF41Q9H4P4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF41Q9H4P4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF41Q9H4P4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RNF41Q9H4P4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF41Q9H4P4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.68■■□□□ 1.7
RNF41Q9H4P4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RNF41Q9H4P4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RNF41Q9H4P4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF41Q9H4P4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.68■■□□□ 1.7
RNF41Q9H4P4 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC25.68■■□□□ 1.7
RNF41Q9H4P4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC25.68■■□□□ 1.7
RNF41Q9H4P4 SMUG1P1-201ENST00000590640 811 ntBASIC25.68■■□□□ 1.7
RNF41Q9H4P4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RNF41Q9H4P4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
RNF41Q9H4P4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
RNF41Q9H4P4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
RNF41Q9H4P4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 AK1-201ENST00000223836 736 ntTSL 3 BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC25.66■■□□□ 1.7
RNF41Q9H4P4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 OR7E47P-201ENST00000546390 1422 ntBASIC25.65■■□□□ 1.7
RNF41Q9H4P4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.65■■□□□ 1.7
RNF41Q9H4P4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF41Q9H4P4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.64■■□□□ 1.7
RNF41Q9H4P4 LINC00526-201ENST00000581067 1875 ntBASIC25.64■■□□□ 1.7
RNF41Q9H4P4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
RNF41Q9H4P4 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.64■■□□□ 1.7
RNF41Q9H4P4 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
RNF41Q9H4P4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC25.64■■□□□ 1.69
RNF41Q9H4P4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
RNF41Q9H4P4 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
RNF41Q9H4P4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC25.64■■□□□ 1.69
RNF41Q9H4P4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.64■■□□□ 1.69
RNF41Q9H4P4 AC139530.1-201ENST00000575312 1977 ntBASIC25.64■■□□□ 1.69
RNF41Q9H4P4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF41Q9H4P4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
RNF41Q9H4P4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
RNF41Q9H4P4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF41Q9H4P4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC25.63■■□□□ 1.69
RNF41Q9H4P4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.63■■□□□ 1.69
RNF41Q9H4P4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
RNF41Q9H4P4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms