Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
LSG1Q9H089 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.78
LSG1Q9H089 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
LSG1Q9H089 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC26.14■■□□□ 1.77
LSG1Q9H089 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LSG1Q9H089 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.13■■□□□ 1.77
LSG1Q9H089 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC26.13■■□□□ 1.77
LSG1Q9H089 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC26.13■■□□□ 1.77
LSG1Q9H089 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
LSG1Q9H089 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LSG1Q9H089 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LSG1Q9H089 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
LSG1Q9H089 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
LSG1Q9H089 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
LSG1Q9H089 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.12■■□□□ 1.77
LSG1Q9H089 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.12■■□□□ 1.77
LSG1Q9H089 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LSG1Q9H089 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.11■■□□□ 1.77
LSG1Q9H089 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC26.11■■□□□ 1.77
LSG1Q9H089 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LSG1Q9H089 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LSG1Q9H089 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LSG1Q9H089 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.1■■□□□ 1.77
LSG1Q9H089 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
LSG1Q9H089 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LSG1Q9H089 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
LSG1Q9H089 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
LSG1Q9H089 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LSG1Q9H089 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LSG1Q9H089 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.1■■□□□ 1.77
LSG1Q9H089 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LSG1Q9H089 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LSG1Q9H089 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
LSG1Q9H089 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LSG1Q9H089 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
LSG1Q9H089 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LSG1Q9H089 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.09■■□□□ 1.77
LSG1Q9H089 WWC2-AS2-201ENST00000578387 2183 ntBASIC26.09■■□□□ 1.77
LSG1Q9H089 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.09■■□□□ 1.77
LSG1Q9H089 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
LSG1Q9H089 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
LSG1Q9H089 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC26.09■■□□□ 1.77
LSG1Q9H089 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LSG1Q9H089 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
LSG1Q9H089 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.09■■□□□ 1.77
LSG1Q9H089 SLC47A1P1-202ENST00000449666 945 ntBASIC26.09■■□□□ 1.77
LSG1Q9H089 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC26.09■■□□□ 1.77
LSG1Q9H089 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC26.09■■□□□ 1.77
LSG1Q9H089 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
LSG1Q9H089 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LSG1Q9H089 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.09■■□□□ 1.77
LSG1Q9H089 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
LSG1Q9H089 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LSG1Q9H089 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
LSG1Q9H089 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LSG1Q9H089 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC26.08■■□□□ 1.77
LSG1Q9H089 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LSG1Q9H089 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC26.08■■□□□ 1.77
LSG1Q9H089 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
LSG1Q9H089 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
LSG1Q9H089 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.08■■□□□ 1.77
LSG1Q9H089 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LSG1Q9H089 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.08■■□□□ 1.77
LSG1Q9H089 AC079089.2-201ENST00000531211 1277 ntBASIC26.08■■□□□ 1.77
LSG1Q9H089 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
LSG1Q9H089 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.07■■□□□ 1.76
LSG1Q9H089 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LSG1Q9H089 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LSG1Q9H089 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
LSG1Q9H089 UNC93B3-201ENST00000308076 687 ntBASIC26.07■■□□□ 1.76
LSG1Q9H089 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.07■■□□□ 1.76
LSG1Q9H089 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LSG1Q9H089 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
LSG1Q9H089 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
LSG1Q9H089 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LSG1Q9H089 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LSG1Q9H089 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LSG1Q9H089 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
LSG1Q9H089 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
LSG1Q9H089 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LSG1Q9H089 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LSG1Q9H089 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.05■■□□□ 1.76
LSG1Q9H089 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.05■■□□□ 1.76
LSG1Q9H089 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC26.05■■□□□ 1.76
LSG1Q9H089 AC068587.7-201ENST00000641602 218 ntBASIC26.05■■□□□ 1.76
LSG1Q9H089 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.05■■□□□ 1.76
LSG1Q9H089 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
LSG1Q9H089 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LSG1Q9H089 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
LSG1Q9H089 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
LSG1Q9H089 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC26.04■■□□□ 1.76
LSG1Q9H089 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.04■■□□□ 1.76
LSG1Q9H089 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
LSG1Q9H089 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
LSG1Q9H089 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
LSG1Q9H089 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
LSG1Q9H089 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LSG1Q9H089 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LSG1Q9H089 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC26.03■■□□□ 1.76
LSG1Q9H089 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms