Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.93■■□□□ 1.74
UPF3BQ9BZI7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
UPF3BQ9BZI7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.93■■□□□ 1.74
UPF3BQ9BZI7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
UPF3BQ9BZI7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
UPF3BQ9BZI7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
UPF3BQ9BZI7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
UPF3BQ9BZI7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
UPF3BQ9BZI7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
UPF3BQ9BZI7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
UPF3BQ9BZI7 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
UPF3BQ9BZI7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
UPF3BQ9BZI7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
UPF3BQ9BZI7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.92■■□□□ 1.74
UPF3BQ9BZI7 MIR3181-201ENST00000578512 73 ntBASIC25.92■■□□□ 1.74
UPF3BQ9BZI7 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.92■■□□□ 1.74
UPF3BQ9BZI7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
UPF3BQ9BZI7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
UPF3BQ9BZI7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
UPF3BQ9BZI7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
UPF3BQ9BZI7 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
UPF3BQ9BZI7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
UPF3BQ9BZI7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.91■■□□□ 1.74
UPF3BQ9BZI7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
UPF3BQ9BZI7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
UPF3BQ9BZI7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
UPF3BQ9BZI7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
UPF3BQ9BZI7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
UPF3BQ9BZI7 BID-212ENST00000614949 1988 ntTSL 5 BASIC25.9■■□□□ 1.74
UPF3BQ9BZI7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC25.9■■□□□ 1.74
UPF3BQ9BZI7 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.9■■□□□ 1.74
UPF3BQ9BZI7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.9■■□□□ 1.74
UPF3BQ9BZI7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
UPF3BQ9BZI7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 SRD5A1P1-201ENST00000442297 786 ntBASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
UPF3BQ9BZI7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.89■■□□□ 1.73
UPF3BQ9BZI7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.88■■□□□ 1.73
UPF3BQ9BZI7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
UPF3BQ9BZI7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
UPF3BQ9BZI7 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
UPF3BQ9BZI7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
UPF3BQ9BZI7 MIR4466-201ENST00000606121 54 ntBASIC25.88■■□□□ 1.73
UPF3BQ9BZI7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC25.88■■□□□ 1.73
UPF3BQ9BZI7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
UPF3BQ9BZI7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
UPF3BQ9BZI7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
UPF3BQ9BZI7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
UPF3BQ9BZI7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 AL137060.1-201ENST00000618151 2648 ntBASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 AC010542.4-201ENST00000563151 1910 ntBASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 AL031602.1-201ENST00000633169 911 ntBASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
UPF3BQ9BZI7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC25.86■■□□□ 1.73
UPF3BQ9BZI7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
UPF3BQ9BZI7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC25.86■■□□□ 1.73
UPF3BQ9BZI7 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC25.86■■□□□ 1.73
UPF3BQ9BZI7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.86■■□□□ 1.73
UPF3BQ9BZI7 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC25.86■■□□□ 1.73
UPF3BQ9BZI7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
UPF3BQ9BZI7 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.86■■□□□ 1.73
UPF3BQ9BZI7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC25.85■■□□□ 1.73
UPF3BQ9BZI7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC25.85■■□□□ 1.73
UPF3BQ9BZI7 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.85■■□□□ 1.73
UPF3BQ9BZI7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
UPF3BQ9BZI7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
UPF3BQ9BZI7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
UPF3BQ9BZI7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC25.85■■□□□ 1.73
UPF3BQ9BZI7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms