Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 AC114781.2-201ENST00000515670 394 ntTSL 3 BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 CIR1P1-201ENST00000524055 1133 ntBASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 AC131235.4-201ENST00000609288 620 ntBASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 AC130448.1-201ENST00000624179 1733 ntBASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
KRTAP3-3Q9BYR6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 SNHG26-202ENST00000422542 1106 ntTSL 3 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 AL357060.2-201ENST00000440578 1025 ntTSL 3 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 AL158053.1-201ENST00000441503 453 ntBASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 LINC00333-201ENST00000446314 613 ntTSL 5 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 SCARNA7-201ENST00000458797 330 ntBASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 TRAV11-201ENST00000539512 339 ntBASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 VPS4B-207ENST00000591519 551 ntTSL 2 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 LINC01115-203ENST00000606068 577 ntBASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 AL136304.1-201ENST00000607790 509 ntBASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 AC022558.3-201ENST00000616598 688 ntBASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 AC073857.1-201ENST00000625082 1054 ntBASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
KRTAP3-3Q9BYR6 ST7-AS1-201ENST00000456775 1889 ntBASIC13.27□□□□□ -0.28
KRTAP3-3Q9BYR6 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
KRTAP3-3Q9BYR6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
KRTAP3-3Q9BYR6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC13.27□□□□□ -0.28
KRTAP3-3Q9BYR6 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 snosnR66.1-201ENST00000391095 99 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 AL359541.1-201ENST00000431097 575 ntTSL 3 BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 FAM8A4P-201ENST00000435433 1213 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 MTND4P18-201ENST00000447010 465 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 AC003075.1-206ENST00000448664 541 ntTSL 3 BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 NDUFA5P5-201ENST00000468361 342 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 DUXAP5-201ENST00000529668 529 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 AL163195.2-203ENST00000553604 573 ntTSL 4 BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 CSNK1A1P1-202ENST00000563423 981 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 TERF1P2-201ENST00000583350 1212 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 AC010680.5-201ENST00000605021 463 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 ZRANB2-207ENST00000611683 1257 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 AC010809.3-201ENST00000621310 641 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 AL512506.2-201ENST00000624472 458 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 AC005785.2-201ENST00000624655 631 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 AC091948.2-201ENST00000636510 279 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 MTND4P29-201ENST00000503122 1372 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 AC005702.3-201ENST00000585345 1447 ntBASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
KRTAP3-3Q9BYR6 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 AL591499.1-201ENST00000307155 1153 ntBASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 AL390879.1-201ENST00000439143 386 ntBASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 THAP6-210ENST00000507557 542 ntTSL 4 BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 PRELID3BP5-201ENST00000508612 460 ntBASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 B2M-202ENST00000544417 933 ntTSL 5 BASIC13.26□□□□□ -0.29
KRTAP3-3Q9BYR6 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms