Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF5Q99942 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RNF5Q99942 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF5Q99942 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RNF5Q99942 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RNF5Q99942 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.4■□□□□ 0.38
RNF5Q99942 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF5Q99942 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF5Q99942 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF5Q99942 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.4■□□□□ 0.38
RNF5Q99942 AC010525.1-201ENST00000585559 441 ntBASIC17.4■□□□□ 0.38
RNF5Q99942 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.4■□□□□ 0.38
RNF5Q99942 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF5Q99942 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RNF5Q99942 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF5Q99942 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RNF5Q99942 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF5Q99942 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RNF5Q99942 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RNF5Q99942 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF5Q99942 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF5Q99942 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF5Q99942 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF5Q99942 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
RNF5Q99942 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.39■□□□□ 0.37
RNF5Q99942 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF5Q99942 SLC47A1P1-202ENST00000449666 945 ntBASIC17.39■□□□□ 0.37
RNF5Q99942 AC233992.3-201ENST00000607491 485 ntBASIC17.39■□□□□ 0.37
RNF5Q99942 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF5Q99942 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RNF5Q99942 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF5Q99942 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.39■□□□□ 0.37
RNF5Q99942 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.39■□□□□ 0.37
RNF5Q99942 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RNF5Q99942 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RNF5Q99942 OR7E47P-201ENST00000546390 1422 ntBASIC17.38■□□□□ 0.37
RNF5Q99942 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF5Q99942 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF5Q99942 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF5Q99942 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF5Q99942 C11orf96-202ENST00000528572 1834 ntBASIC17.38■□□□□ 0.37
RNF5Q99942 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF5Q99942 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.38■□□□□ 0.37
RNF5Q99942 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF5Q99942 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF5Q99942 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RNF5Q99942 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RNF5Q99942 AC024257.2-201ENST00000549699 147 ntBASIC17.38■□□□□ 0.37
RNF5Q99942 MIR4767-201ENST00000582827 78 ntBASIC17.38■□□□□ 0.37
RNF5Q99942 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RNF5Q99942 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RNF5Q99942 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF5Q99942 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RNF5Q99942 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.38■□□□□ 0.37
RNF5Q99942 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF5Q99942 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF5Q99942 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF5Q99942 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF5Q99942 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF5Q99942 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.37■□□□□ 0.37
RNF5Q99942 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF5Q99942 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF5Q99942 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RNF5Q99942 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RNF5Q99942 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.37■□□□□ 0.37
RNF5Q99942 EP400NL-214ENST00000641289 2402 ntBASIC17.36■□□□□ 0.37
RNF5Q99942 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF5Q99942 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF5Q99942 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF5Q99942 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF5Q99942 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.36■□□□□ 0.37
RNF5Q99942 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.36■□□□□ 0.37
RNF5Q99942 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF5Q99942 AL034346.1-201ENST00000568244 1277 ntBASIC17.36■□□□□ 0.37
RNF5Q99942 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RNF5Q99942 AC106739.1-201ENST00000617035 715 ntBASIC17.36■□□□□ 0.37
RNF5Q99942 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF5Q99942 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RNF5Q99942 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF5Q99942 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF5Q99942 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF5Q99942 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF5Q99942 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF5Q99942 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RNF5Q99942 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RNF5Q99942 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF5Q99942 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF5Q99942 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF5Q99942 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF5Q99942 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF5Q99942 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RNF5Q99942 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF5Q99942 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF5Q99942 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF5Q99942 EDA-201ENST00000338901 1233 ntBASIC17.35■□□□□ 0.37
RNF5Q99942 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF5Q99942 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RNF5Q99942 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF5Q99942 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
RNF5Q99942 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms