Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFI1Q99684 AC005703.6-201ENST00000623265 1329 ntBASIC18.81■□□□□ 0.6
GFI1Q99684 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFI1Q99684 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFI1Q99684 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.81■□□□□ 0.6
GFI1Q99684 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.81■□□□□ 0.6
GFI1Q99684 MIR4508-201ENST00000584178 70 ntBASIC18.81■□□□□ 0.6
GFI1Q99684 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.81■□□□□ 0.6
GFI1Q99684 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFI1Q99684 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFI1Q99684 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFI1Q99684 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GFI1Q99684 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFI1Q99684 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.81■□□□□ 0.6
GFI1Q99684 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GFI1Q99684 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.8■□□□□ 0.6
GFI1Q99684 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
GFI1Q99684 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.8■□□□□ 0.6
GFI1Q99684 ABHD17AP5-201ENST00000580133 923 ntBASIC18.8■□□□□ 0.6
GFI1Q99684 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.8■□□□□ 0.6
GFI1Q99684 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.8■□□□□ 0.6
GFI1Q99684 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
GFI1Q99684 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.8■□□□□ 0.6
GFI1Q99684 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
GFI1Q99684 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GFI1Q99684 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.79■□□□□ 0.6
GFI1Q99684 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.79■□□□□ 0.6
GFI1Q99684 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
GFI1Q99684 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.79■□□□□ 0.6
GFI1Q99684 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.79■□□□□ 0.6
GFI1Q99684 AC103834.1-201ENST00000520383 144 ntBASIC18.79■□□□□ 0.6
GFI1Q99684 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.79■□□□□ 0.6
GFI1Q99684 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFI1Q99684 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GFI1Q99684 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFI1Q99684 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFI1Q99684 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GFI1Q99684 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFI1Q99684 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GFI1Q99684 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFI1Q99684 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFI1Q99684 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GFI1Q99684 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
GFI1Q99684 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
GFI1Q99684 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GFI1Q99684 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GFI1Q99684 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.78■□□□□ 0.6
GFI1Q99684 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GFI1Q99684 MIR6722-201ENST00000617286 78 ntBASIC18.78■□□□□ 0.6
GFI1Q99684 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFI1Q99684 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFI1Q99684 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFI1Q99684 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
GFI1Q99684 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
GFI1Q99684 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GFI1Q99684 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
GFI1Q99684 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
GFI1Q99684 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.77■□□□□ 0.6
GFI1Q99684 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
GFI1Q99684 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
GFI1Q99684 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.77■□□□□ 0.6
GFI1Q99684 AC137630.3-201ENST00000607245 391 ntBASIC18.77■□□□□ 0.6
GFI1Q99684 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.77■□□□□ 0.6
GFI1Q99684 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.77■□□□□ 0.6
GFI1Q99684 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.77■□□□□ 0.6
GFI1Q99684 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
GFI1Q99684 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
GFI1Q99684 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.77■□□□□ 0.59
GFI1Q99684 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GFI1Q99684 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
GFI1Q99684 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
GFI1Q99684 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
GFI1Q99684 AC026471.6-201ENST00000622954 1905 ntBASIC18.76■□□□□ 0.59
GFI1Q99684 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.76■□□□□ 0.59
GFI1Q99684 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GFI1Q99684 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GFI1Q99684 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
GFI1Q99684 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.76■□□□□ 0.59
GFI1Q99684 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.76■□□□□ 0.59
GFI1Q99684 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
GFI1Q99684 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
GFI1Q99684 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
GFI1Q99684 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.76■□□□□ 0.59
GFI1Q99684 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.76■□□□□ 0.59
GFI1Q99684 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
GFI1Q99684 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
GFI1Q99684 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms