Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 CCDC92B-201ENST00000575506 885 ntBASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 TPRG1LP1-201ENST00000598702 760 ntBASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CDK5RAP1Q96SZ6 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDK5RAP1Q96SZ6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.6■■□□□ 1.21
CDK5RAP1Q96SZ6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDK5RAP1Q96SZ6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CDK5RAP1Q96SZ6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
CDK5RAP1Q96SZ6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.6■■□□□ 1.21
CDK5RAP1Q96SZ6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.6■■□□□ 1.21
CDK5RAP1Q96SZ6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
CDK5RAP1Q96SZ6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 KRT18P14-201ENST00000534205 1250 ntBASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
CDK5RAP1Q96SZ6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDK5RAP1Q96SZ6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDK5RAP1Q96SZ6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
CDK5RAP1Q96SZ6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDK5RAP1Q96SZ6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.58■■□□□ 1.21
CDK5RAP1Q96SZ6 AL162430.1-201ENST00000480705 870 ntBASIC22.58■■□□□ 1.21
CDK5RAP1Q96SZ6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC22.58■■□□□ 1.21
CDK5RAP1Q96SZ6 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC22.58■■□□□ 1.21
CDK5RAP1Q96SZ6 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CDK5RAP1Q96SZ6 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CDK5RAP1Q96SZ6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDK5RAP1Q96SZ6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC22.58■■□□□ 1.2
CDK5RAP1Q96SZ6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
CDK5RAP1Q96SZ6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
CDK5RAP1Q96SZ6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 AC009237.3-201ENST00000393279 1427 ntBASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 DUX4L2-201ENST00000561772 1275 ntBASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 AC104564.3-201ENST00000582367 638 ntBASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 DUX4L6-201ENST00000626483 1275 ntBASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 DUX4L1-201ENST00000627662 1275 ntBASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 DUX4L8-201ENST00000629013 1275 ntBASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 DUX4L3-201ENST00000630187 1275 ntBASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 DUX4L7-201ENST00000630678 1275 ntBASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 DUX4L5-201ENST00000630834 1275 ntBASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 OR7E47P-201ENST00000546390 1422 ntBASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CDK5RAP1Q96SZ6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDK5RAP1Q96SZ6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDK5RAP1Q96SZ6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.56■■□□□ 1.2
CDK5RAP1Q96SZ6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CDK5RAP1Q96SZ6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CDK5RAP1Q96SZ6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CDK5RAP1Q96SZ6 AL034346.1-201ENST00000568244 1277 ntBASIC22.56■■□□□ 1.2
CDK5RAP1Q96SZ6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.56■■□□□ 1.2
CDK5RAP1Q96SZ6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.56■■□□□ 1.2
CDK5RAP1Q96SZ6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC22.56■■□□□ 1.2
CDK5RAP1Q96SZ6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 ESRRAP2-201ENST00000418437 1549 ntBASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CDK5RAP1Q96SZ6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms