Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCC1Q96S66 AL451085.2-201ENST00000605085 799 ntBASIC18.18■□□□□ 0.5
CLCC1Q96S66 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCC1Q96S66 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCC1Q96S66 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCC1Q96S66 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCC1Q96S66 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLCC1Q96S66 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCC1Q96S66 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.18■□□□□ 0.5
CLCC1Q96S66 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLCC1Q96S66 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLCC1Q96S66 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCC1Q96S66 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCC1Q96S66 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCC1Q96S66 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCC1Q96S66 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCC1Q96S66 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CLCC1Q96S66 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCC1Q96S66 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.17■□□□□ 0.5
CLCC1Q96S66 AC239859.2-201ENST00000444165 318 ntBASIC18.17■□□□□ 0.5
CLCC1Q96S66 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCC1Q96S66 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.17■□□□□ 0.5
CLCC1Q96S66 KRT125P-201ENST00000546827 989 ntBASIC18.17■□□□□ 0.5
CLCC1Q96S66 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.17■□□□□ 0.5
CLCC1Q96S66 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CLCC1Q96S66 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CLCC1Q96S66 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCC1Q96S66 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CLCC1Q96S66 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CLCC1Q96S66 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCC1Q96S66 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCC1Q96S66 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCC1Q96S66 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCC1Q96S66 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCC1Q96S66 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CLCC1Q96S66 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCC1Q96S66 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CLCC1Q96S66 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CLCC1Q96S66 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
CLCC1Q96S66 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCC1Q96S66 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CLCC1Q96S66 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLCC1Q96S66 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CLCC1Q96S66 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCC1Q96S66 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.15■□□□□ 0.5
CLCC1Q96S66 AC009299.2-201ENST00000482477 511 ntBASIC18.15■□□□□ 0.5
CLCC1Q96S66 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCC1Q96S66 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCC1Q96S66 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.15■□□□□ 0.5
CLCC1Q96S66 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CLCC1Q96S66 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.15■□□□□ 0.5
CLCC1Q96S66 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CLCC1Q96S66 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CLCC1Q96S66 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CLCC1Q96S66 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCC1Q96S66 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.14■□□□□ 0.5
CLCC1Q96S66 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.14■□□□□ 0.5
CLCC1Q96S66 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
CLCC1Q96S66 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CLCC1Q96S66 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CLCC1Q96S66 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCC1Q96S66 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCC1Q96S66 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CLCC1Q96S66 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCC1Q96S66 SNX5-217ENST00000606557 1087 ntBASIC18.14■□□□□ 0.49
CLCC1Q96S66 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCC1Q96S66 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CLCC1Q96S66 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
CLCC1Q96S66 AC021242.3-201ENST00000607598 1377 ntBASIC18.14■□□□□ 0.49
CLCC1Q96S66 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCC1Q96S66 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
CLCC1Q96S66 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CLCC1Q96S66 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.14■□□□□ 0.49
CLCC1Q96S66 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CLCC1Q96S66 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCC1Q96S66 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCC1Q96S66 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CLCC1Q96S66 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.13■□□□□ 0.49
CLCC1Q96S66 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.13■□□□□ 0.49
CLCC1Q96S66 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCC1Q96S66 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CLCC1Q96S66 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
CLCC1Q96S66 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCC1Q96S66 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCC1Q96S66 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CLCC1Q96S66 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms