Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A3Q96HJ5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
MS4A3Q96HJ5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 AC092068.2-201ENST00000590491 1708 ntBASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 LINC01529-204ENST00000636474 1715 ntBASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 DUSP8P3-201ENST00000399571 1760 ntBASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MS4A3Q96HJ5 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MS4A3Q96HJ5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A3Q96HJ5 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
MS4A3Q96HJ5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.41■□□□□ 0.7
MS4A3Q96HJ5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A3Q96HJ5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.41■□□□□ 0.7
MS4A3Q96HJ5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
MS4A3Q96HJ5 FP325331.1-202ENST00000623531 1380 ntBASIC19.41■□□□□ 0.7
MS4A3Q96HJ5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.41■□□□□ 0.7
MS4A3Q96HJ5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A3Q96HJ5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MS4A3Q96HJ5 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
MS4A3Q96HJ5 SYT6-210ENST00000641643 1587 ntBASIC19.4■□□□□ 0.7
MS4A3Q96HJ5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A3Q96HJ5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
MS4A3Q96HJ5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A3Q96HJ5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A3Q96HJ5 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC19.4■□□□□ 0.7
MS4A3Q96HJ5 AC092171.4-201ENST00000609130 632 ntBASIC19.4■□□□□ 0.7
MS4A3Q96HJ5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A3Q96HJ5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A3Q96HJ5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A3Q96HJ5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MS4A3Q96HJ5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A3Q96HJ5 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A3Q96HJ5 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A3Q96HJ5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.39■□□□□ 0.7
MS4A3Q96HJ5 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A3Q96HJ5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
MS4A3Q96HJ5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 DUX4L4-201ENST00000566884 1269 ntBASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
MS4A3Q96HJ5 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 UNC93B3-201ENST00000308076 687 ntBASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 SERBP1P1-201ENST00000396021 1160 ntBASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 pRNA.6-201ENST00000610482 90 ntBASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 pRNA.5-201ENST00000612139 90 ntBASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 AC110285.6-201ENST00000617652 491 ntBASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 pRNA.11-201ENST00000618423 90 ntBASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 pRNA.13-201ENST00000619112 90 ntBASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
MS4A3Q96HJ5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 MIR3181-201ENST00000578512 73 ntBASIC19.37■□□□□ 0.69
MS4A3Q96HJ5 AC004223.2-201ENST00000590309 544 ntBASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms