Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMD4Q96H15 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMD4Q96H15 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMD4Q96H15 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.26■□□□□ 0.51
TIMD4Q96H15 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TIMD4Q96H15 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMD4Q96H15 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMD4Q96H15 PKD1P6-201ENST00000343738 4769 ntBASIC18.26■□□□□ 0.51
TIMD4Q96H15 LINC01960-201ENST00000563759 1884 ntBASIC18.26■□□□□ 0.51
TIMD4Q96H15 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TIMD4Q96H15 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TIMD4Q96H15 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TIMD4Q96H15 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMD4Q96H15 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.25■□□□□ 0.51
TIMD4Q96H15 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMD4Q96H15 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TIMD4Q96H15 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TIMD4Q96H15 BX005040.4-201ENST00000637145 1518 ntBASIC18.25■□□□□ 0.51
TIMD4Q96H15 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMD4Q96H15 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMD4Q96H15 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.25■□□□□ 0.51
TIMD4Q96H15 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMD4Q96H15 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMD4Q96H15 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.25■□□□□ 0.51
TIMD4Q96H15 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
TIMD4Q96H15 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIMD4Q96H15 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TIMD4Q96H15 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.24■□□□□ 0.51
TIMD4Q96H15 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TIMD4Q96H15 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TIMD4Q96H15 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TIMD4Q96H15 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
TIMD4Q96H15 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.24■□□□□ 0.51
TIMD4Q96H15 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TIMD4Q96H15 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TIMD4Q96H15 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TIMD4Q96H15 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.24■□□□□ 0.51
TIMD4Q96H15 CCDC92B-201ENST00000575506 885 ntBASIC18.24■□□□□ 0.51
TIMD4Q96H15 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TIMD4Q96H15 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.24■□□□□ 0.51
TIMD4Q96H15 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TIMD4Q96H15 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMD4Q96H15 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TIMD4Q96H15 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TIMD4Q96H15 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMD4Q96H15 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.23■□□□□ 0.51
TIMD4Q96H15 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMD4Q96H15 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMD4Q96H15 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.23■□□□□ 0.51
TIMD4Q96H15 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.23■□□□□ 0.51
TIMD4Q96H15 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TIMD4Q96H15 KRT18P14-201ENST00000534205 1250 ntBASIC18.23■□□□□ 0.51
TIMD4Q96H15 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMD4Q96H15 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMD4Q96H15 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TIMD4Q96H15 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TIMD4Q96H15 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TIMD4Q96H15 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.22■□□□□ 0.51
TIMD4Q96H15 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMD4Q96H15 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMD4Q96H15 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMD4Q96H15 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMD4Q96H15 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.22■□□□□ 0.51
TIMD4Q96H15 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.22■□□□□ 0.51
TIMD4Q96H15 SMUG1P1-201ENST00000590640 811 ntBASIC18.22■□□□□ 0.51
TIMD4Q96H15 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TIMD4Q96H15 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
TIMD4Q96H15 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMD4Q96H15 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.22■□□□□ 0.51
TIMD4Q96H15 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMD4Q96H15 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.22■□□□□ 0.51
TIMD4Q96H15 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TIMD4Q96H15 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TIMD4Q96H15 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TIMD4Q96H15 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TIMD4Q96H15 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TIMD4Q96H15 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TIMD4Q96H15 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.21■□□□□ 0.51
TIMD4Q96H15 TERF1P2-201ENST00000583350 1212 ntBASIC18.21■□□□□ 0.51
TIMD4Q96H15 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.21■□□□□ 0.51
TIMD4Q96H15 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TIMD4Q96H15 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TIMD4Q96H15 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TIMD4Q96H15 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TIMD4Q96H15 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.21■□□□□ 0.51
TIMD4Q96H15 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TIMD4Q96H15 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMD4Q96H15 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TIMD4Q96H15 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TIMD4Q96H15 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.2■□□□□ 0.5
TIMD4Q96H15 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMD4Q96H15 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMD4Q96H15 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TIMD4Q96H15 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.2■□□□□ 0.5
TIMD4Q96H15 DUX4L2-201ENST00000561772 1275 ntBASIC18.2■□□□□ 0.5
TIMD4Q96H15 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
TIMD4Q96H15 DUX4L6-201ENST00000626483 1275 ntBASIC18.2■□□□□ 0.5
TIMD4Q96H15 DUX4L1-201ENST00000627662 1275 ntBASIC18.2■□□□□ 0.5
TIMD4Q96H15 DUX4L8-201ENST00000629013 1275 ntBASIC18.2■□□□□ 0.5
TIMD4Q96H15 DUX4L3-201ENST00000630187 1275 ntBASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms