Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.27■□□□□ 0.84
CTHRC1Q96CG8 AC126544.1-201ENST00000580842 1059 ntBASIC20.27■□□□□ 0.84
CTHRC1Q96CG8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CTHRC1Q96CG8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.27■□□□□ 0.84
CTHRC1Q96CG8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTHRC1Q96CG8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTHRC1Q96CG8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTHRC1Q96CG8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
CTHRC1Q96CG8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CTHRC1Q96CG8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 IGHV3-19-201ENST00000521488 291 ntBASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 AC005837.3-201ENST00000612163 286 ntBASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
CTHRC1Q96CG8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 EP400NL-214ENST00000641289 2402 ntBASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTHRC1Q96CG8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CTHRC1Q96CG8 AC092053.2-201ENST00000640557 1818 ntBASIC20.23■□□□□ 0.83
CTHRC1Q96CG8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTHRC1Q96CG8 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTHRC1Q96CG8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CTHRC1Q96CG8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CTHRC1Q96CG8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.23■□□□□ 0.83
CTHRC1Q96CG8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CTHRC1Q96CG8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CTHRC1Q96CG8 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CTHRC1Q96CG8 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CTHRC1Q96CG8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 AC079834.2-201ENST00000609776 1949 ntBASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 AC142381.2-201ENST00000566120 298 ntBASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CTHRC1Q96CG8 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms