Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
APOBEC3DQ96AK3 AC010141.3-201ENST00000456659 717 ntBASIC18.83■□□□□ 0.6
APOBEC3DQ96AK3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.83■□□□□ 0.6
APOBEC3DQ96AK3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.83■□□□□ 0.6
APOBEC3DQ96AK3 AC106739.1-201ENST00000617035 715 ntBASIC18.83■□□□□ 0.6
APOBEC3DQ96AK3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOBEC3DQ96AK3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
APOBEC3DQ96AK3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.83■□□□□ 0.6
APOBEC3DQ96AK3 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.83■□□□□ 0.6
APOBEC3DQ96AK3 AC139530.1-201ENST00000575312 1977 ntBASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 AC079834.2-201ENST00000609776 1949 ntBASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 LINC00526-201ENST00000581067 1875 ntBASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOBEC3DQ96AK3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 AC079089.2-201ENST00000531211 1277 ntBASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 AC233992.3-201ENST00000607491 485 ntBASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 AC092053.2-201ENST00000640557 1818 ntBASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.81■□□□□ 0.6
APOBEC3DQ96AK3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 AC110285.6-201ENST00000617652 491 ntBASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.8■□□□□ 0.6
APOBEC3DQ96AK3 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 EDA-201ENST00000338901 1233 ntBASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APOBEC3DQ96AK3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 OXCT2P1-201ENST00000447263 1535 ntBASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
APOBEC3DQ96AK3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms