Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HPS1Q92902 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS1Q92902 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.68■□□□□ 0.74
HPS1Q92902 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS1Q92902 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS1Q92902 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.68■□□□□ 0.74
HPS1Q92902 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HPS1Q92902 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS1Q92902 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
HPS1Q92902 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS1Q92902 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS1Q92902 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS1Q92902 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
HPS1Q92902 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HPS1Q92902 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.67■□□□□ 0.74
HPS1Q92902 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.67■□□□□ 0.74
HPS1Q92902 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.67■□□□□ 0.74
HPS1Q92902 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.67■□□□□ 0.74
HPS1Q92902 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HPS1Q92902 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.67■□□□□ 0.74
HPS1Q92902 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.66■□□□□ 0.74
HPS1Q92902 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HPS1Q92902 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS1Q92902 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS1Q92902 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS1Q92902 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS1Q92902 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS1Q92902 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
HPS1Q92902 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HPS1Q92902 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.66■□□□□ 0.74
HPS1Q92902 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.66■□□□□ 0.74
HPS1Q92902 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
HPS1Q92902 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.65■□□□□ 0.74
HPS1Q92902 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS1Q92902 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS1Q92902 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS1Q92902 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.65■□□□□ 0.74
HPS1Q92902 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
HPS1Q92902 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
HPS1Q92902 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS1Q92902 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS1Q92902 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS1Q92902 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.65■□□□□ 0.74
HPS1Q92902 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS1Q92902 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS1Q92902 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HPS1Q92902 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HPS1Q92902 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
HPS1Q92902 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
HPS1Q92902 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
HPS1Q92902 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HPS1Q92902 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HPS1Q92902 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS1Q92902 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HPS1Q92902 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.64■□□□□ 0.73
HPS1Q92902 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HPS1Q92902 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS1Q92902 LSR-205ENST00000427250 1606 ntTSL 2 BASIC19.64■□□□□ 0.73
HPS1Q92902 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS1Q92902 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HPS1Q92902 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS1Q92902 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HPS1Q92902 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
HPS1Q92902 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.63■□□□□ 0.73
HPS1Q92902 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS1Q92902 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS1Q92902 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS1Q92902 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HPS1Q92902 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
HPS1Q92902 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS1Q92902 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.63■□□□□ 0.73
HPS1Q92902 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.63■□□□□ 0.73
HPS1Q92902 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS1Q92902 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS1Q92902 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HPS1Q92902 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS1Q92902 C11orf96-202ENST00000528572 1834 ntBASIC19.62■□□□□ 0.73
HPS1Q92902 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS1Q92902 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS1Q92902 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
HPS1Q92902 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
HPS1Q92902 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS1Q92902 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS1Q92902 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.62■□□□□ 0.73
HPS1Q92902 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS1Q92902 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.62■□□□□ 0.73
HPS1Q92902 AC010997.5-201ENST00000609182 354 ntBASIC19.62■□□□□ 0.73
HPS1Q92902 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
HPS1Q92902 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS1Q92902 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS1Q92902 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.62■□□□□ 0.73
HPS1Q92902 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HPS1Q92902 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HPS1Q92902 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HPS1Q92902 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS1Q92902 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.61■□□□□ 0.73
HPS1Q92902 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS1Q92902 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HPS1Q92902 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
HPS1Q92902 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms