Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRUB1Q8WWH5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 U85056.1-201ENST00000616429 682 ntBASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 LINC01529-204ENST00000636474 1715 ntBASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.89■□□□□ 0.77
TRUB1Q8WWH5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 AF106564.1-201ENST00000607058 2553 ntBASIC19.88■□□□□ 0.77
TRUB1Q8WWH5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.87■□□□□ 0.77
TRUB1Q8WWH5 AL157384.1-201ENST00000445995 2473 ntBASIC19.86■□□□□ 0.77
TRUB1Q8WWH5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB1Q8WWH5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB1Q8WWH5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB1Q8WWH5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB1Q8WWH5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB1Q8WWH5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB1Q8WWH5 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.86■□□□□ 0.77
TRUB1Q8WWH5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
TRUB1Q8WWH5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB1Q8WWH5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
TRUB1Q8WWH5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRUB1Q8WWH5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 KRT18P60-201ENST00000312876 1297 ntBASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRUB1Q8WWH5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 LINC01960-201ENST00000563759 1884 ntBASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 AC244015.2-201ENST00000616358 1861 ntBASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB1Q8WWH5 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
TRUB1Q8WWH5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB1Q8WWH5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB1Q8WWH5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.83■□□□□ 0.77
TRUB1Q8WWH5 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB1Q8WWH5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB1Q8WWH5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms