Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RETREG2Q8NC44 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RETREG2Q8NC44 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
RETREG2Q8NC44 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
RETREG2Q8NC44 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RETREG2Q8NC44 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RETREG2Q8NC44 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
RETREG2Q8NC44 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
RETREG2Q8NC44 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RETREG2Q8NC44 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
RETREG2Q8NC44 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
RETREG2Q8NC44 AC079630.1-202ENST00000618127 1840 ntBASIC24.64■■□□□ 1.54
RETREG2Q8NC44 ID1-201ENST00000376105 1233 ntBASIC24.64■■□□□ 1.54
RETREG2Q8NC44 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC24.64■■□□□ 1.54
RETREG2Q8NC44 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.64■■□□□ 1.54
RETREG2Q8NC44 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC24.64■■□□□ 1.54
RETREG2Q8NC44 AC010525.1-201ENST00000585559 441 ntBASIC24.64■■□□□ 1.54
RETREG2Q8NC44 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.64■■□□□ 1.54
RETREG2Q8NC44 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RETREG2Q8NC44 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
RETREG2Q8NC44 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
RETREG2Q8NC44 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
RETREG2Q8NC44 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RETREG2Q8NC44 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 OR2I1P-207ENST00000453522 948 ntBASIC24.63■■□□□ 1.53
RETREG2Q8NC44 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RETREG2Q8NC44 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC24.62■■□□□ 1.53
RETREG2Q8NC44 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RETREG2Q8NC44 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RETREG2Q8NC44 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.62■■□□□ 1.53
RETREG2Q8NC44 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.62■■□□□ 1.53
RETREG2Q8NC44 TERF1P2-201ENST00000583350 1212 ntBASIC24.62■■□□□ 1.53
RETREG2Q8NC44 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RETREG2Q8NC44 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RETREG2Q8NC44 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.62■■□□□ 1.53
RETREG2Q8NC44 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.61■■□□□ 1.53
RETREG2Q8NC44 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
RETREG2Q8NC44 C1orf229-201ENST00000623686 2258 ntBASIC24.6■■□□□ 1.53
RETREG2Q8NC44 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
RETREG2Q8NC44 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
RETREG2Q8NC44 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.6■■□□□ 1.53
RETREG2Q8NC44 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
RETREG2Q8NC44 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC24.6■■□□□ 1.53
RETREG2Q8NC44 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
RETREG2Q8NC44 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RETREG2Q8NC44 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RETREG2Q8NC44 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
RETREG2Q8NC44 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.59■■□□□ 1.53
RETREG2Q8NC44 AP005435.1-201ENST00000529293 1178 ntBASIC24.59■■□□□ 1.53
RETREG2Q8NC44 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.59■■□□□ 1.53
RETREG2Q8NC44 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.59■■□□□ 1.53
RETREG2Q8NC44 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
RETREG2Q8NC44 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.58■■□□□ 1.53
RETREG2Q8NC44 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.58■■□□□ 1.53
RETREG2Q8NC44 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.58■■□□□ 1.53
RETREG2Q8NC44 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RETREG2Q8NC44 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
RETREG2Q8NC44 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RETREG2Q8NC44 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
RETREG2Q8NC44 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
RETREG2Q8NC44 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RETREG2Q8NC44 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.57■■□□□ 1.52
RETREG2Q8NC44 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RETREG2Q8NC44 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
RETREG2Q8NC44 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms