Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SYNPOQ8N3V7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.21■■□□□ 1.15
SYNPOQ8N3V7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SYNPOQ8N3V7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SYNPOQ8N3V7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SYNPOQ8N3V7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SYNPOQ8N3V7 ABHD17AP1-201ENST00000358206 933 ntBASIC22.2■■□□□ 1.14
SYNPOQ8N3V7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.2■■□□□ 1.14
SYNPOQ8N3V7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
SYNPOQ8N3V7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.2■■□□□ 1.14
SYNPOQ8N3V7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SYNPOQ8N3V7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.19■■□□□ 1.14
SYNPOQ8N3V7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SYNPOQ8N3V7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.19■■□□□ 1.14
SYNPOQ8N3V7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
SYNPOQ8N3V7 LINC00543-201ENST00000567234 1845 ntBASIC22.19■■□□□ 1.14
SYNPOQ8N3V7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SYNPOQ8N3V7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 MIR663A-201ENST00000385250 93 ntBASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SYNPOQ8N3V7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SYNPOQ8N3V7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SYNPOQ8N3V7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.17■■□□□ 1.14
SYNPOQ8N3V7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC22.17■■□□□ 1.14
SYNPOQ8N3V7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SYNPOQ8N3V7 AC079630.1-202ENST00000618127 1840 ntBASIC22.17■■□□□ 1.14
SYNPOQ8N3V7 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.17■■□□□ 1.14
SYNPOQ8N3V7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SYNPOQ8N3V7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.16■■□□□ 1.14
SYNPOQ8N3V7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SYNPOQ8N3V7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SYNPOQ8N3V7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SYNPOQ8N3V7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SYNPOQ8N3V7 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SYNPOQ8N3V7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.16■■□□□ 1.14
SYNPOQ8N3V7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SYNPOQ8N3V7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 TMEM191A-211ENST00000637163 1067 ntBASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.15■■□□□ 1.14
SYNPOQ8N3V7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SYNPOQ8N3V7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SYNPOQ8N3V7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
SYNPOQ8N3V7 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
SYNPOQ8N3V7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.14■■□□□ 1.13
SYNPOQ8N3V7 AC231657.2-201ENST00000624556 255 ntBASIC22.14■■□□□ 1.13
SYNPOQ8N3V7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SYNPOQ8N3V7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
SYNPOQ8N3V7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
SYNPOQ8N3V7 AC009237.3-201ENST00000393279 1427 ntBASIC22.14■■□□□ 1.13
SYNPOQ8N3V7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC22.14■■□□□ 1.13
SYNPOQ8N3V7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
SYNPOQ8N3V7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 AC142086.2-201ENST00000569753 217 ntBASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SYNPOQ8N3V7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms