Protein–RNA interactions for Protein: Q8N2G8

GHDC, GH3 domain-containing protein, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GHDCQ8N2G8 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GHDCQ8N2G8 SLC47A1P1-202ENST00000449666 945 ntBASIC20.2■□□□□ 0.82
GHDCQ8N2G8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GHDCQ8N2G8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.2■□□□□ 0.82
GHDCQ8N2G8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.2■□□□□ 0.82
GHDCQ8N2G8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.2■□□□□ 0.82
GHDCQ8N2G8 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
GHDCQ8N2G8 TSPY26P-201ENST00000476365 1326 ntBASIC20.2■□□□□ 0.82
GHDCQ8N2G8 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
GHDCQ8N2G8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
GHDCQ8N2G8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.19■□□□□ 0.82
GHDCQ8N2G8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 AC133637.1-201ENST00000624115 1537 ntBASIC20.18■□□□□ 0.82
GHDCQ8N2G8 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.18■□□□□ 0.82
GHDCQ8N2G8 LINC00565-201ENST00000562710 2331 ntBASIC20.18■□□□□ 0.82
GHDCQ8N2G8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 AC079630.1-202ENST00000618127 1840 ntBASIC20.17■□□□□ 0.82
GHDCQ8N2G8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 FP325331.1-202ENST00000623531 1380 ntBASIC20.17■□□□□ 0.82
GHDCQ8N2G8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
GHDCQ8N2G8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GHDCQ8N2G8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
GHDCQ8N2G8 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
GHDCQ8N2G8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GHDCQ8N2G8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GHDCQ8N2G8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GHDCQ8N2G8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.16■□□□□ 0.82
GHDCQ8N2G8 IGHV3-19-201ENST00000521488 291 ntBASIC20.16■□□□□ 0.82
GHDCQ8N2G8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.16■□□□□ 0.82
GHDCQ8N2G8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GHDCQ8N2G8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GHDCQ8N2G8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
GHDCQ8N2G8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 AC034268.1-201ENST00000441047 882 ntBASIC20.15■□□□□ 0.82
GHDCQ8N2G8 YBX1P1-201ENST00000445822 960 ntBASIC20.15■□□□□ 0.82
GHDCQ8N2G8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 AL499627.2-201ENST00000606283 725 ntBASIC20.15■□□□□ 0.82
GHDCQ8N2G8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 AL358852.1-201ENST00000623174 1268 ntBASIC20.15■□□□□ 0.82
GHDCQ8N2G8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
GHDCQ8N2G8 EP400NL-214ENST00000641289 2402 ntBASIC20.14■□□□□ 0.82
GHDCQ8N2G8 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GHDCQ8N2G8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GHDCQ8N2G8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
GHDCQ8N2G8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms