Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 TSPY26P-201ENST00000476365 1326 ntBASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PPP4R3AQ6IN85 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PPP4R3AQ6IN85 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
PPP4R3AQ6IN85 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PPP4R3AQ6IN85 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
PPP4R3AQ6IN85 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PPP4R3AQ6IN85 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.72■■□□□ 1.55
PPP4R3AQ6IN85 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PPP4R3AQ6IN85 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PPP4R3AQ6IN85 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PPP4R3AQ6IN85 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
PPP4R3AQ6IN85 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PPP4R3AQ6IN85 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PPP4R3AQ6IN85 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC24.71■■□□□ 1.55
PPP4R3AQ6IN85 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.71■■□□□ 1.55
PPP4R3AQ6IN85 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC24.71■■□□□ 1.55
PPP4R3AQ6IN85 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PPP4R3AQ6IN85 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PPP4R3AQ6IN85 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.71■■□□□ 1.55
PPP4R3AQ6IN85 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.71■■□□□ 1.55
PPP4R3AQ6IN85 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
PPP4R3AQ6IN85 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PPP4R3AQ6IN85 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PPP4R3AQ6IN85 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
PPP4R3AQ6IN85 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.7■■□□□ 1.54
PPP4R3AQ6IN85 AC105265.2-201ENST00000467189 838 ntBASIC24.7■■□□□ 1.54
PPP4R3AQ6IN85 AC079089.2-201ENST00000531211 1277 ntBASIC24.7■■□□□ 1.54
PPP4R3AQ6IN85 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PPP4R3AQ6IN85 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PPP4R3AQ6IN85 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PPP4R3AQ6IN85 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PPP4R3AQ6IN85 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.68■■□□□ 1.54
PPP4R3AQ6IN85 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PPP4R3AQ6IN85 AC019069.1-201ENST00000610008 1333 ntBASIC24.68■■□□□ 1.54
PPP4R3AQ6IN85 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.68■■□□□ 1.54
PPP4R3AQ6IN85 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.68■■□□□ 1.54
PPP4R3AQ6IN85 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PPP4R3AQ6IN85 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
PPP4R3AQ6IN85 AC233723.2-201ENST00000623798 2106 ntBASIC24.68■■□□□ 1.54
PPP4R3AQ6IN85 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PPP4R3AQ6IN85 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
PPP4R3AQ6IN85 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R3AQ6IN85 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC24.67■■□□□ 1.54
PPP4R3AQ6IN85 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
PPP4R3AQ6IN85 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R3AQ6IN85 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.67■■□□□ 1.54
PPP4R3AQ6IN85 MIR572-201ENST00000384983 95 ntBASIC24.67■■□□□ 1.54
PPP4R3AQ6IN85 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.67■■□□□ 1.54
PPP4R3AQ6IN85 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R3AQ6IN85 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R3AQ6IN85 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
PPP4R3AQ6IN85 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC24.67■■□□□ 1.54
PPP4R3AQ6IN85 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3AQ6IN85 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3AQ6IN85 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3AQ6IN85 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PPP4R3AQ6IN85 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3AQ6IN85 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.66■■□□□ 1.54
PPP4R3AQ6IN85 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3AQ6IN85 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3AQ6IN85 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3AQ6IN85 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PPP4R3AQ6IN85 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.66■■□□□ 1.54
PPP4R3AQ6IN85 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
PPP4R3AQ6IN85 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC24.65■■□□□ 1.54
PPP4R3AQ6IN85 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R3AQ6IN85 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.65■■□□□ 1.54
PPP4R3AQ6IN85 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.65■■□□□ 1.54
PPP4R3AQ6IN85 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R3AQ6IN85 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R3AQ6IN85 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC24.65■■□□□ 1.54
PPP4R3AQ6IN85 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PPP4R3AQ6IN85 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.65■■□□□ 1.54
PPP4R3AQ6IN85 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PPP4R3AQ6IN85 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.65■■□□□ 1.54
PPP4R3AQ6IN85 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
PPP4R3AQ6IN85 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms