Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
KRT40Q6A162 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
KRT40Q6A162 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
KRT40Q6A162 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
KRT40Q6A162 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
KRT40Q6A162 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.23■■□□□ 1.63
KRT40Q6A162 EDA-201ENST00000338901 1233 ntBASIC25.23■■□□□ 1.63
KRT40Q6A162 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
KRT40Q6A162 DUX4L19-201ENST00000557448 1267 ntBASIC25.23■■□□□ 1.63
KRT40Q6A162 AC087623.3-201ENST00000607047 1098 ntBASIC25.23■■□□□ 1.63
KRT40Q6A162 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.23■■□□□ 1.63
KRT40Q6A162 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
KRT40Q6A162 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
KRT40Q6A162 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
KRT40Q6A162 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
KRT40Q6A162 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC25.22■■□□□ 1.63
KRT40Q6A162 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC25.22■■□□□ 1.63
KRT40Q6A162 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
KRT40Q6A162 OR2I1P-207ENST00000453522 948 ntBASIC25.22■■□□□ 1.63
KRT40Q6A162 AL162430.1-201ENST00000480705 870 ntBASIC25.22■■□□□ 1.63
KRT40Q6A162 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC25.22■■□□□ 1.63
KRT40Q6A162 AL138724.1-201ENST00000606771 1088 ntBASIC25.22■■□□□ 1.63
KRT40Q6A162 MIR6821-201ENST00000617625 74 ntBASIC25.22■■□□□ 1.63
KRT40Q6A162 AL136967.2-201ENST00000623968 743 ntBASIC25.22■■□□□ 1.63
KRT40Q6A162 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
KRT40Q6A162 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
KRT40Q6A162 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
KRT40Q6A162 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KRT40Q6A162 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.21■■□□□ 1.63
KRT40Q6A162 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
KRT40Q6A162 AF213884.3-201ENST00000563833 479 ntBASIC25.21■■□□□ 1.63
KRT40Q6A162 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.21■■□□□ 1.63
KRT40Q6A162 AC010525.1-201ENST00000585559 441 ntBASIC25.21■■□□□ 1.63
KRT40Q6A162 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
KRT40Q6A162 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
KRT40Q6A162 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KRT40Q6A162 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
KRT40Q6A162 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
KRT40Q6A162 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
KRT40Q6A162 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
KRT40Q6A162 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
KRT40Q6A162 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.2■■□□□ 1.62
KRT40Q6A162 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.2■■□□□ 1.62
KRT40Q6A162 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.2■■□□□ 1.62
KRT40Q6A162 AC092053.2-201ENST00000640557 1818 ntBASIC25.2■■□□□ 1.62
KRT40Q6A162 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
KRT40Q6A162 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
KRT40Q6A162 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.2■■□□□ 1.62
KRT40Q6A162 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC25.2■■□□□ 1.62
KRT40Q6A162 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC25.19■■□□□ 1.62
KRT40Q6A162 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KRT40Q6A162 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
KRT40Q6A162 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
KRT40Q6A162 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC25.19■■□□□ 1.62
KRT40Q6A162 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
KRT40Q6A162 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KRT40Q6A162 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KRT40Q6A162 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KRT40Q6A162 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
KRT40Q6A162 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.19■■□□□ 1.62
KRT40Q6A162 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
KRT40Q6A162 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.19■■□□□ 1.62
KRT40Q6A162 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.19■■□□□ 1.62
KRT40Q6A162 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
KRT40Q6A162 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.19■■□□□ 1.62
KRT40Q6A162 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KRT40Q6A162 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC25.18■■□□□ 1.62
KRT40Q6A162 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.18■■□□□ 1.62
KRT40Q6A162 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC25.18■■□□□ 1.62
KRT40Q6A162 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.18■■□□□ 1.62
KRT40Q6A162 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC25.18■■□□□ 1.62
KRT40Q6A162 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
KRT40Q6A162 AC011298.3-201ENST00000615796 283 ntBASIC25.18■■□□□ 1.62
KRT40Q6A162 AC136469.2-201ENST00000623944 1028 ntBASIC25.18■■□□□ 1.62
KRT40Q6A162 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
KRT40Q6A162 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
KRT40Q6A162 LINC00565-201ENST00000562710 2331 ntBASIC25.18■■□□□ 1.62
KRT40Q6A162 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KRT40Q6A162 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
KRT40Q6A162 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KRT40Q6A162 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC25.17■■□□□ 1.62
KRT40Q6A162 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.17■■□□□ 1.62
KRT40Q6A162 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
KRT40Q6A162 AC097381.1-201ENST00000429019 1296 ntBASIC25.17■■□□□ 1.62
KRT40Q6A162 GLI3-203ENST00000437480 451 ntTSL 2 BASIC25.17■■□□□ 1.62
KRT40Q6A162 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.17■■□□□ 1.62
KRT40Q6A162 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.17■■□□□ 1.62
KRT40Q6A162 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
KRT40Q6A162 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
KRT40Q6A162 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
KRT40Q6A162 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
KRT40Q6A162 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.16■■□□□ 1.62
KRT40Q6A162 MYB-221ENST00000527615 2381 ntTSL 5 BASIC25.16■■□□□ 1.62
KRT40Q6A162 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
KRT40Q6A162 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KRT40Q6A162 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC25.16■■□□□ 1.62
KRT40Q6A162 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
KRT40Q6A162 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
KRT40Q6A162 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
KRT40Q6A162 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms