Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LPCAT4Q643R3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
LPCAT4Q643R3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.49■□□□□ 0.87
LPCAT4Q643R3 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LPCAT4Q643R3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LPCAT4Q643R3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LPCAT4Q643R3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
LPCAT4Q643R3 AC144652.1-201ENST00000609974 1624 ntBASIC20.49■□□□□ 0.87
LPCAT4Q643R3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.49■□□□□ 0.87
LPCAT4Q643R3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
LPCAT4Q643R3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.48■□□□□ 0.87
LPCAT4Q643R3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LPCAT4Q643R3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LPCAT4Q643R3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.87
LPCAT4Q643R3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.45■□□□□ 0.86
LPCAT4Q643R3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
LPCAT4Q643R3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.45■□□□□ 0.86
LPCAT4Q643R3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LPCAT4Q643R3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LPCAT4Q643R3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LPCAT4Q643R3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
LPCAT4Q643R3 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
LPCAT4Q643R3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LPCAT4Q643R3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LPCAT4Q643R3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
LPCAT4Q643R3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LPCAT4Q643R3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.43■□□□□ 0.86
LPCAT4Q643R3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LPCAT4Q643R3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LPCAT4Q643R3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.43■□□□□ 0.86
LPCAT4Q643R3 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LPCAT4Q643R3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LPCAT4Q643R3 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LPCAT4Q643R3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
LPCAT4Q643R3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LPCAT4Q643R3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.42■□□□□ 0.86
LPCAT4Q643R3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms