Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCSMST1Q4G0I0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 AL117328.2-201ENST00000624617 1940 ntBASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 EP400NL-214ENST00000641289 2402 ntBASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 AC091305.1-201ENST00000479476 895 ntBASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 AC068587.7-201ENST00000641602 218 ntBASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 AC139530.1-201ENST00000575312 1977 ntBASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCSMST1Q4G0I0 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 AC010141.3-201ENST00000456659 717 ntBASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.18■□□□□ 0.98
CCSMST1Q4G0I0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CCSMST1Q4G0I0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSMST1Q4G0I0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCSMST1Q4G0I0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CCSMST1Q4G0I0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.17■□□□□ 0.98
CCSMST1Q4G0I0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.17■□□□□ 0.98
CCSMST1Q4G0I0 TSPY26P-201ENST00000476365 1326 ntBASIC21.17■□□□□ 0.98
CCSMST1Q4G0I0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCSMST1Q4G0I0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CCSMST1Q4G0I0 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCSMST1Q4G0I0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCSMST1Q4G0I0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCSMST1Q4G0I0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 LINC00526-201ENST00000581067 1875 ntBASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 IGHV3-19-201ENST00000521488 291 ntBASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.16■□□□□ 0.98
CCSMST1Q4G0I0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCSMST1Q4G0I0 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CCSMST1Q4G0I0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCSMST1Q4G0I0 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCSMST1Q4G0I0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.15■□□□□ 0.98
CCSMST1Q4G0I0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCSMST1Q4G0I0 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CCSMST1Q4G0I0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCSMST1Q4G0I0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCSMST1Q4G0I0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CCSMST1Q4G0I0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
CCSMST1Q4G0I0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.14■□□□□ 0.98
CCSMST1Q4G0I0 OXCT2P1-201ENST00000447263 1535 ntBASIC21.14■□□□□ 0.98
CCSMST1Q4G0I0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCSMST1Q4G0I0 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CCSMST1Q4G0I0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.14■□□□□ 0.98
CCSMST1Q4G0I0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCSMST1Q4G0I0 AC242852.2-201ENST00000615738 1807 ntBASIC21.14■□□□□ 0.97
CCSMST1Q4G0I0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCSMST1Q4G0I0 AC079089.2-201ENST00000531211 1277 ntBASIC21.14■□□□□ 0.97
CCSMST1Q4G0I0 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CCSMST1Q4G0I0 AC087239.1-201ENST00000622671 572 ntBASIC21.14■□□□□ 0.97
CCSMST1Q4G0I0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CCSMST1Q4G0I0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CCSMST1Q4G0I0 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.14■□□□□ 0.97
CCSMST1Q4G0I0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCSMST1Q4G0I0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCSMST1Q4G0I0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CCSMST1Q4G0I0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.13■□□□□ 0.97
CCSMST1Q4G0I0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.13■□□□□ 0.97
CCSMST1Q4G0I0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.13■□□□□ 0.97
CCSMST1Q4G0I0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms