Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.3■■□□□ 1
RSPO4Q2I0M5 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.3■■□□□ 1
RSPO4Q2I0M5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RSPO4Q2I0M5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.3■■□□□ 1
RSPO4Q2I0M5 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.3■■□□□ 1
RSPO4Q2I0M5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.3■■□□□ 1
RSPO4Q2I0M5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
RSPO4Q2I0M5 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RSPO4Q2I0M5 SLC6A10P-202ENST00000431994 2058 ntBASIC21.3■■□□□ 1
RSPO4Q2I0M5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.29■■□□□ 1
RSPO4Q2I0M5 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.29■■□□□ 1
RSPO4Q2I0M5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.29■■□□□ 1
RSPO4Q2I0M5 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RSPO4Q2I0M5 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.29■■□□□ 1
RSPO4Q2I0M5 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.29■■□□□ 1
RSPO4Q2I0M5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.29■■□□□ 1
RSPO4Q2I0M5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RSPO4Q2I0M5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
RSPO4Q2I0M5 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RSPO4Q2I0M5 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.29■■□□□ 1
RSPO4Q2I0M5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RSPO4Q2I0M5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.29■■□□□ 1
RSPO4Q2I0M5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
RSPO4Q2I0M5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.28■■□□□ 1
RSPO4Q2I0M5 AP001160.3-201ENST00000601484 763 ntBASIC21.28■■□□□ 1
RSPO4Q2I0M5 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RSPO4Q2I0M5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RSPO4Q2I0M5 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.28■■□□□ 1
RSPO4Q2I0M5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
RSPO4Q2I0M5 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.28■■□□□ 1
RSPO4Q2I0M5 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.27■■□□□ 1
RSPO4Q2I0M5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.27■■□□□ 1
RSPO4Q2I0M5 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.27■■□□□ 1
RSPO4Q2I0M5 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RSPO4Q2I0M5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.27■■□□□ 1
RSPO4Q2I0M5 KRT18P21-201ENST00000515767 1272 ntBASIC21.27■■□□□ 1
RSPO4Q2I0M5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.27■■□□□ 1
RSPO4Q2I0M5 AC083880.1-201ENST00000608266 535 ntBASIC21.27■■□□□ 1
RSPO4Q2I0M5 AC010536.3-201ENST00000620306 533 ntBASIC21.27■■□□□ 1
RSPO4Q2I0M5 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RSPO4Q2I0M5 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.27■■□□□ 1
RSPO4Q2I0M5 MME-217ENST00000616757 1315 ntTSL 5 BASIC21.27■□□□□ 0.99
RSPO4Q2I0M5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RSPO4Q2I0M5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RSPO4Q2I0M5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
RSPO4Q2I0M5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RSPO4Q2I0M5 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RSPO4Q2I0M5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RSPO4Q2I0M5 REXO1L12P-201ENST00000622156 912 ntBASIC21.26■□□□□ 0.99
RSPO4Q2I0M5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RSPO4Q2I0M5 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RSPO4Q2I0M5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.25■□□□□ 0.99
RSPO4Q2I0M5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.25■□□□□ 0.99
RSPO4Q2I0M5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.25■□□□□ 0.99
RSPO4Q2I0M5 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RSPO4Q2I0M5 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RSPO4Q2I0M5 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RSPO4Q2I0M5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 LINC01529-204ENST00000636474 1715 ntBASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 UBE2SP1-201ENST00000450587 669 ntBASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RSPO4Q2I0M5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 AC097658.1-201ENST00000475555 843 ntBASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 LINC01023-201ENST00000606054 436 ntBASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 AC068587.7-201ENST00000641602 218 ntBASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
RSPO4Q2I0M5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.22■□□□□ 0.99
RSPO4Q2I0M5 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 12.6 ms