Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5BP61020 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RAB5BP61020 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5BP61020 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5BP61020 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB5BP61020 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5BP61020 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5BP61020 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RAB5BP61020 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RAB5BP61020 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5BP61020 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB5BP61020 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RAB5BP61020 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5BP61020 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.1■□□□□ 0.33
RAB5BP61020 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5BP61020 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5BP61020 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RAB5BP61020 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5BP61020 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB5BP61020 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5BP61020 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5BP61020 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.09■□□□□ 0.33
RAB5BP61020 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5BP61020 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.09■□□□□ 0.33
RAB5BP61020 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5BP61020 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5BP61020 AC010542.4-201ENST00000563151 1910 ntBASIC17.09■□□□□ 0.33
RAB5BP61020 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5BP61020 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5BP61020 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5BP61020 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5BP61020 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.09■□□□□ 0.33
RAB5BP61020 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5BP61020 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RAB5BP61020 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB5BP61020 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB5BP61020 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB5BP61020 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
RAB5BP61020 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
RAB5BP61020 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.08■□□□□ 0.33
RAB5BP61020 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
RAB5BP61020 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB5BP61020 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.08■□□□□ 0.32
RAB5BP61020 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB5BP61020 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB5BP61020 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB5BP61020 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5BP61020 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5BP61020 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5BP61020 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAB5BP61020 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB5BP61020 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5BP61020 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5BP61020 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB5BP61020 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5BP61020 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB5BP61020 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5BP61020 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB5BP61020 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5BP61020 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB5BP61020 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5BP61020 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RAB5BP61020 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5BP61020 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5BP61020 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAB5BP61020 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB5BP61020 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB5BP61020 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB5BP61020 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB5BP61020 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
RAB5BP61020 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5BP61020 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5BP61020 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5BP61020 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5BP61020 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAB5BP61020 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB5BP61020 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5BP61020 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5BP61020 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5BP61020 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB5BP61020 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5BP61020 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5BP61020 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5BP61020 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
RAB5BP61020 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RAB5BP61020 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5BP61020 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB5BP61020 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5BP61020 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
RAB5BP61020 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5BP61020 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5BP61020 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5BP61020 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5BP61020 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5BP61020 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5BP61020 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB5BP61020 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB5BP61020 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB5BP61020 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB5BP61020 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms