Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
AP3S2P59780 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S2P59780 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3S2P59780 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S2P59780 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S2P59780 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S2P59780 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
AP3S2P59780 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3S2P59780 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.66■□□□□ 0.58
AP3S2P59780 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S2P59780 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP3S2P59780 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
AP3S2P59780 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.65■□□□□ 0.58
AP3S2P59780 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
AP3S2P59780 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
AP3S2P59780 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.65■□□□□ 0.58
AP3S2P59780 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP3S2P59780 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP3S2P59780 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP3S2P59780 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S2P59780 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S2P59780 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
AP3S2P59780 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S2P59780 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.64■□□□□ 0.57
AP3S2P59780 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
AP3S2P59780 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.64■□□□□ 0.57
AP3S2P59780 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S2P59780 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.64■□□□□ 0.57
AP3S2P59780 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S2P59780 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S2P59780 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S2P59780 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.64■□□□□ 0.57
AP3S2P59780 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S2P59780 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3S2P59780 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S2P59780 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S2P59780 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S2P59780 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S2P59780 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
AP3S2P59780 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S2P59780 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.63■□□□□ 0.57
AP3S2P59780 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S2P59780 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
AP3S2P59780 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S2P59780 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
AP3S2P59780 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S2P59780 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
AP3S2P59780 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S2P59780 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3S2P59780 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S2P59780 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S2P59780 Z98882.1-201ENST00000622160 2253 ntBASIC18.62■□□□□ 0.57
AP3S2P59780 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S2P59780 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S2P59780 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.62■□□□□ 0.57
AP3S2P59780 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.62■□□□□ 0.57
AP3S2P59780 AC016575.1-201ENST00000607026 382 ntBASIC18.62■□□□□ 0.57
AP3S2P59780 AC022413.1-201ENST00000624602 984 ntBASIC18.62■□□□□ 0.57
AP3S2P59780 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S2P59780 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S2P59780 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S2P59780 AC144652.1-201ENST00000609974 1624 ntBASIC18.62■□□□□ 0.57
AP3S2P59780 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S2P59780 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S2P59780 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.62■□□□□ 0.57
AP3S2P59780 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
AP3S2P59780 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S2P59780 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
AP3S2P59780 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.62■□□□□ 0.57
AP3S2P59780 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3S2P59780 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
AP3S2P59780 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S2P59780 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S2P59780 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S2P59780 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
AP3S2P59780 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
AP3S2P59780 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.61■□□□□ 0.57
AP3S2P59780 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.61■□□□□ 0.57
AP3S2P59780 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
AP3S2P59780 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.61■□□□□ 0.57
AP3S2P59780 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S2P59780 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP3S2P59780 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.61■□□□□ 0.57
AP3S2P59780 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S2P59780 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.6■□□□□ 0.57
AP3S2P59780 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S2P59780 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S2P59780 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
AP3S2P59780 AL157384.1-201ENST00000445995 2473 ntBASIC18.6■□□□□ 0.57
AP3S2P59780 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S2P59780 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S2P59780 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
AP3S2P59780 AC018755.3-202ENST00000596210 929 ntBASIC18.6■□□□□ 0.57
AP3S2P59780 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S2P59780 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S2P59780 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3S2P59780 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
AP3S2P59780 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.6■□□□□ 0.57
AP3S2P59780 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3S2P59780 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 164.5 ms