Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 TERF1P2-201ENST00000583350 1212 ntBASIC19.49■□□□□ 0.71
CLDN18P56856 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLDN18P56856 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN18P56856 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.49■□□□□ 0.71
CLDN18P56856 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLDN18P56856 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CLDN18P56856 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN18P56856 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN18P56856 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CLDN18P56856 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN18P56856 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN18P56856 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN18P56856 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN18P56856 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.48■□□□□ 0.71
CLDN18P56856 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN18P56856 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN18P56856 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN18P56856 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CLDN18P56856 AC087742.1-201ENST00000575880 1738 ntBASIC19.48■□□□□ 0.71
CLDN18P56856 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN18P56856 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLDN18P56856 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN18P56856 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN18P56856 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.47■□□□□ 0.71
CLDN18P56856 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN18P56856 KRT18P14-201ENST00000534205 1250 ntBASIC19.47■□□□□ 0.71
CLDN18P56856 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN18P56856 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN18P56856 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLDN18P56856 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.47■□□□□ 0.71
CLDN18P56856 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN18P56856 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.46■□□□□ 0.71
CLDN18P56856 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLDN18P56856 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CLDN18P56856 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.46■□□□□ 0.71
CLDN18P56856 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.46■□□□□ 0.71
CLDN18P56856 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.46■□□□□ 0.71
CLDN18P56856 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CLDN18P56856 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CLDN18P56856 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CLDN18P56856 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.46■□□□□ 0.71
CLDN18P56856 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CLDN18P56856 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN18P56856 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN18P56856 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CLDN18P56856 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CLDN18P56856 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.45■□□□□ 0.7
CLDN18P56856 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CLDN18P56856 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN18P56856 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN18P56856 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN18P56856 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.44■□□□□ 0.7
CLDN18P56856 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.44■□□□□ 0.7
CLDN18P56856 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN18P56856 AC104564.3-201ENST00000582367 638 ntBASIC19.44■□□□□ 0.7
CLDN18P56856 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.44■□□□□ 0.7
CLDN18P56856 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CLDN18P56856 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN18P56856 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN18P56856 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CLDN18P56856 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN18P56856 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN18P56856 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN18P56856 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN18P56856 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.43■□□□□ 0.7
CLDN18P56856 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN18P56856 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.43■□□□□ 0.7
CLDN18P56856 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CLDN18P56856 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN18P56856 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN18P56856 KRT18P5-201ENST00000436075 1291 ntBASIC19.43■□□□□ 0.7
CLDN18P56856 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN18P56856 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CLDN18P56856 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN18P56856 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.43■□□□□ 0.7
CLDN18P56856 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN18P56856 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN18P56856 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CLDN18P56856 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN18P56856 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN18P56856 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CLDN18P56856 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CLDN18P56856 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CLDN18P56856 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN18P56856 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CLDN18P56856 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.42■□□□□ 0.7
CLDN18P56856 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.42■□□□□ 0.7
CLDN18P56856 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms