Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN12P56749 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN12P56749 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN12P56749 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN12P56749 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN12P56749 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.88■□□□□ 0.61
CLDN12P56749 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN12P56749 SNX5-217ENST00000606557 1087 ntBASIC18.88■□□□□ 0.61
CLDN12P56749 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN12P56749 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN12P56749 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN12P56749 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN12P56749 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN12P56749 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN12P56749 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN12P56749 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN12P56749 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN12P56749 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CLDN12P56749 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN12P56749 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN12P56749 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN12P56749 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN12P56749 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.87■□□□□ 0.61
CLDN12P56749 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN12P56749 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN12P56749 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN12P56749 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN12P56749 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN12P56749 AC244015.2-201ENST00000616358 1861 ntBASIC18.86■□□□□ 0.61
CLDN12P56749 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN12P56749 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN12P56749 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN12P56749 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN12P56749 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.86■□□□□ 0.61
CLDN12P56749 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN12P56749 AC010980.1-201ENST00000587192 1142 ntBASIC18.86■□□□□ 0.61
CLDN12P56749 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN12P56749 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN12P56749 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLDN12P56749 AF106564.1-201ENST00000607058 2553 ntBASIC18.86■□□□□ 0.61
CLDN12P56749 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN12P56749 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN12P56749 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLDN12P56749 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLDN12P56749 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.85■□□□□ 0.61
CLDN12P56749 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CLDN12P56749 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.85■□□□□ 0.61
CLDN12P56749 HSD17B1P1-201ENST00000590052 955 ntBASIC18.85■□□□□ 0.61
CLDN12P56749 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN12P56749 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN12P56749 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
CLDN12P56749 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CLDN12P56749 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN12P56749 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLDN12P56749 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN12P56749 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN12P56749 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN12P56749 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN12P56749 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN12P56749 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CLDN12P56749 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.84■□□□□ 0.61
CLDN12P56749 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN12P56749 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN12P56749 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CLDN12P56749 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN12P56749 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN12P56749 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.84■□□□□ 0.61
CLDN12P56749 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN12P56749 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CLDN12P56749 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN12P56749 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
CLDN12P56749 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CLDN12P56749 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.83■□□□□ 0.6
CLDN12P56749 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.83■□□□□ 0.6
CLDN12P56749 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.83■□□□□ 0.6
CLDN12P56749 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CLDN12P56749 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CLDN12P56749 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN12P56749 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN12P56749 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CLDN12P56749 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN12P56749 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.82■□□□□ 0.6
CLDN12P56749 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN12P56749 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN12P56749 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN12P56749 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.82■□□□□ 0.6
CLDN12P56749 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CLDN12P56749 FP325331.1-202ENST00000623531 1380 ntBASIC18.81■□□□□ 0.6
CLDN12P56749 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 AC009086.3-201ENST00000623486 1008 ntBASIC18.81■□□□□ 0.6
CLDN12P56749 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CLDN12P56749 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CLDN12P56749 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms