Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN2P51788 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN2P51788 AC096631.2-201ENST00000436136 790 ntBASIC20.98■□□□□ 0.95
CLCN2P51788 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN2P51788 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.98■□□□□ 0.95
CLCN2P51788 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN2P51788 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN2P51788 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN2P51788 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CLCN2P51788 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLCN2P51788 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN2P51788 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN2P51788 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN2P51788 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CLCN2P51788 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN2P51788 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN2P51788 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN2P51788 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.97■□□□□ 0.95
CLCN2P51788 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN2P51788 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN2P51788 DUX4L19-201ENST00000557448 1267 ntBASIC20.97■□□□□ 0.95
CLCN2P51788 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN2P51788 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN2P51788 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLCN2P51788 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.96■□□□□ 0.95
CLCN2P51788 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN2P51788 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLCN2P51788 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.96■□□□□ 0.95
CLCN2P51788 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN2P51788 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN2P51788 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.96■□□□□ 0.95
CLCN2P51788 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN2P51788 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN2P51788 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLCN2P51788 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.96■□□□□ 0.95
CLCN2P51788 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLCN2P51788 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN2P51788 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN2P51788 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLCN2P51788 AC139530.1-201ENST00000575312 1977 ntBASIC20.96■□□□□ 0.95
CLCN2P51788 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CLCN2P51788 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CLCN2P51788 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN2P51788 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN2P51788 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCN2P51788 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN2P51788 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCN2P51788 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN2P51788 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.95■□□□□ 0.94
CLCN2P51788 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN2P51788 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLCN2P51788 AC079630.1-202ENST00000618127 1840 ntBASIC20.94■□□□□ 0.94
CLCN2P51788 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN2P51788 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN2P51788 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN2P51788 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.94■□□□□ 0.94
CLCN2P51788 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CLCN2P51788 AC110285.6-201ENST00000617652 491 ntBASIC20.94■□□□□ 0.94
CLCN2P51788 AC241377.3-202ENST00000626088 1088 ntBASIC20.94■□□□□ 0.94
CLCN2P51788 AC241585.3-202ENST00000628937 1088 ntBASIC20.94■□□□□ 0.94
CLCN2P51788 AC245100.8-202ENST00000629247 1058 ntBASIC20.94■□□□□ 0.94
CLCN2P51788 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN2P51788 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLCN2P51788 AC026310.3-201ENST00000625186 2373 ntBASIC20.94■□□□□ 0.94
CLCN2P51788 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLCN2P51788 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.93■□□□□ 0.94
CLCN2P51788 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
CLCN2P51788 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
CLCN2P51788 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN2P51788 UNC93B3-201ENST00000308076 687 ntBASIC20.93■□□□□ 0.94
CLCN2P51788 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCN2P51788 AC099791.2-201ENST00000605725 427 ntBASIC20.93■□□□□ 0.94
CLCN2P51788 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.93■□□□□ 0.94
CLCN2P51788 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLCN2P51788 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN2P51788 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN2P51788 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.93■□□□□ 0.94
CLCN2P51788 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CLCN2P51788 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLCN2P51788 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN2P51788 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN2P51788 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN2P51788 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.92■□□□□ 0.94
CLCN2P51788 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN2P51788 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN2P51788 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN2P51788 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN2P51788 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN2P51788 SYT6-210ENST00000641643 1587 ntBASIC20.92■□□□□ 0.94
CLCN2P51788 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLCN2P51788 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN2P51788 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN2P51788 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN2P51788 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN2P51788 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN2P51788 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN2P51788 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CLCN2P51788 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.91■□□□□ 0.94
CLCN2P51788 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.91■□□□□ 0.94
CLCN2P51788 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms