Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.75■□□□□ 0.91
XCR1P46094 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
XCR1P46094 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
XCR1P46094 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.75■□□□□ 0.91
XCR1P46094 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
XCR1P46094 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
XCR1P46094 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.75■□□□□ 0.91
XCR1P46094 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
XCR1P46094 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
XCR1P46094 ESRRAP2-201ENST00000418437 1549 ntBASIC20.74■□□□□ 0.91
XCR1P46094 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
XCR1P46094 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
XCR1P46094 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
XCR1P46094 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.74■□□□□ 0.91
XCR1P46094 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
XCR1P46094 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.74■□□□□ 0.91
XCR1P46094 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.74■□□□□ 0.91
XCR1P46094 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.74■□□□□ 0.91
XCR1P46094 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
XCR1P46094 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
XCR1P46094 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
XCR1P46094 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
XCR1P46094 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
XCR1P46094 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
XCR1P46094 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
XCR1P46094 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
XCR1P46094 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.73■□□□□ 0.91
XCR1P46094 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
XCR1P46094 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
XCR1P46094 TSPY26P-201ENST00000476365 1326 ntBASIC20.73■□□□□ 0.91
XCR1P46094 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
XCR1P46094 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.73■□□□□ 0.91
XCR1P46094 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
XCR1P46094 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
XCR1P46094 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
XCR1P46094 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.72■□□□□ 0.91
XCR1P46094 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.72■□□□□ 0.91
XCR1P46094 IGHV3-19-201ENST00000521488 291 ntBASIC20.72■□□□□ 0.91
XCR1P46094 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.72■□□□□ 0.91
XCR1P46094 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
XCR1P46094 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.72■□□□□ 0.91
XCR1P46094 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
XCR1P46094 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
XCR1P46094 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.72■□□□□ 0.91
XCR1P46094 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.72■□□□□ 0.91
XCR1P46094 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
XCR1P46094 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
XCR1P46094 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.71■□□□□ 0.91
XCR1P46094 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
XCR1P46094 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.71■□□□□ 0.91
XCR1P46094 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.71■□□□□ 0.91
XCR1P46094 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.71■□□□□ 0.91
XCR1P46094 AP005435.1-201ENST00000529293 1178 ntBASIC20.71■□□□□ 0.91
XCR1P46094 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 AC242852.2-201ENST00000615738 1807 ntBASIC20.71■□□□□ 0.91
XCR1P46094 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
XCR1P46094 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
XCR1P46094 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.7■□□□□ 0.9
XCR1P46094 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XCR1P46094 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XCR1P46094 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
XCR1P46094 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XCR1P46094 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
XCR1P46094 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
XCR1P46094 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XCR1P46094 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
XCR1P46094 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
XCR1P46094 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.69■□□□□ 0.9
XCR1P46094 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
XCR1P46094 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.69■□□□□ 0.9
XCR1P46094 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.69■□□□□ 0.9
XCR1P46094 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XCR1P46094 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XCR1P46094 IRS3P-201ENST00000223076 1006 ntBASIC20.69■□□□□ 0.9
XCR1P46094 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.69■□□□□ 0.9
XCR1P46094 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.69■□□□□ 0.9
XCR1P46094 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.69■□□□□ 0.9
XCR1P46094 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.69■□□□□ 0.9
XCR1P46094 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
XCR1P46094 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XCR1P46094 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.69■□□□□ 0.9
XCR1P46094 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XCR1P46094 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
XCR1P46094 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
XCR1P46094 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XCR1P46094 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
XCR1P46094 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XCR1P46094 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
XCR1P46094 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms