Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 MSC7YHR039C 1935 nt4.9□□□□□ -1.62
SSM4P40318 MSR1YHR091C 1932 nt4.9□□□□□ -1.62
SSM4P40318 ASI1YMR119W 1875 nt4.9□□□□□ -1.62
SSM4P40318 EXO5YBR163W 1758 nt4.9□□□□□ -1.62
SSM4P40318 RKM3YBR030W 1659 nt4.9□□□□□ -1.62
SSM4P40318 PUF2YPR042C 3228 nt4.9□□□□□ -1.63
SSM4P40318 DBP3YGL078C 1572 nt4.9□□□□□ -1.63
SSM4P40318 RRP17YDR412W 708 nt4.9□□□□□ -1.63
SSM4P40318 DID4YKL002W 699 nt4.9□□□□□ -1.63
SSM4P40318 MRPL51YPR100W 423 nt4.9□□□□□ -1.63
SSM4P40318 MAF1YDR005C 1188 nt4.89□□□□□ -1.63
SSM4P40318 HIM1YDR317W 1245 nt4.89□□□□□ -1.63
SSM4P40318 LPP1YDR503C 825 nt4.89□□□□□ -1.63
SSM4P40318 MRPS35YGR165W 1038 nt4.89□□□□□ -1.63
SSM4P40318 YRA2YKL214C 612 nt4.89□□□□□ -1.63
SSM4P40318 TMA16YOR252W 537 nt4.89□□□□□ -1.63
SSM4P40318 MFM1YPL060W 1242 nt4.89□□□□□ -1.63
SSM4P40318 MIH1YMR036C 1665 nt4.89□□□□□ -1.63
SSM4P40318 YCR101CYCR101C 549 nt4.88□□□□□ -1.63
SSM4P40318 OPI6YDL096C 327 nt4.88□□□□□ -1.63
SSM4P40318 PSY3YLR376C 729 nt4.88□□□□□ -1.63
SSM4P40318 YMR122W-AYMR122W-A 255 nt4.88□□□□□ -1.63
SSM4P40318 YBL094CYBL094C 333 nt4.88□□□□□ -1.63
SSM4P40318 YOL166CYOL166C 339 nt4.88□□□□□ -1.63
SSM4P40318 TIR2YOR010C 756 nt4.88□□□□□ -1.63
SSM4P40318 PNG1YPL096W 1092 nt4.88□□□□□ -1.63
SSM4P40318 FRE1YLR214W 2061 nt4.88□□□□□ -1.63
SSM4P40318 YML020WYML020W 1995 nt4.88□□□□□ -1.63
SSM4P40318 CDC6YJL194W 1542 nt4.88□□□□□ -1.63
SSM4P40318 PMT6YGR199W 2280 nt4.88□□□□□ -1.63
SSM4P40318 MRS2YOR334W 1413 nt4.87□□□□□ -1.63
SSM4P40318 YGL258W-AYGL258W-A 234 nt4.87□□□□□ -1.63
SSM4P40318 WSS1YHR134W 810 nt4.87□□□□□ -1.63
SSM4P40318 INN1YNL152W 1230 nt4.87□□□□□ -1.63
SSM4P40318 WRS1YOL097C 1299 nt4.87□□□□□ -1.63
SSM4P40318 YER077CYER077C 2067 nt4.87□□□□□ -1.63
SSM4P40318 NAM9YNL137C 1461 nt4.87□□□□□ -1.63
SSM4P40318 SPT6YGR116W 4356 nt4.87□□□□□ -1.63
SSM4P40318 YGR149WYGR149W 1299 nt4.86□□□□□ -1.63
SSM4P40318 YHB1YGR234W 1200 nt4.86□□□□□ -1.63
SSM4P40318 GTT1YIR038C 705 nt4.86□□□□□ -1.63
SSM4P40318 LAC1YKL008C 1257 nt4.86□□□□□ -1.63
SSM4P40318 GCD7YLR291C 1146 nt4.86□□□□□ -1.63
SSM4P40318 NIT3YLR351C 876 nt4.86□□□□□ -1.63
SSM4P40318 RPS1BYML063W 768 nt4.86□□□□□ -1.63
SSM4P40318 GRX1YCL035C 333 nt4.86□□□□□ -1.63
SSM4P40318 MTR4YJL050W 3222 nt4.86□□□□□ -1.63
SSM4P40318 BLM10YFL007W 6432 nt4.86□□□□□ -1.63
SSM4P40318 NUP60YAR002W 1620 nt4.85□□□□□ -1.63
SSM4P40318 YNR063WYNR063W 1824 nt4.85□□□□□ -1.63
SSM4P40318 YPR003CYPR003C 2265 nt4.85□□□□□ -1.63
SSM4P40318 YFR045WYFR045W 930 nt4.85□□□□□ -1.63
SSM4P40318 YLR363W-AYLR363W-A 258 nt4.85□□□□□ -1.63
SSM4P40318 IAH1YOR126C 717 nt4.85□□□□□ -1.63
SSM4P40318 SSP2YOR242C 1116 nt4.85□□□□□ -1.63
SSM4P40318 RPA43YOR340C 981 nt4.85□□□□□ -1.63
SSM4P40318 TAF1YGR274C 3201 nt4.85□□□□□ -1.63
SSM4P40318 KAR5YMR065W 1515 nt4.84□□□□□ -1.63
SSM4P40318 NNK1YKL171W 2787 nt4.84□□□□□ -1.63
SSM4P40318 DDI2YFL061W 678 nt4.84□□□□□ -1.63
SSM4P40318 YGR269WYGR269W 327 nt4.84□□□□□ -1.63
SSM4P40318 IMP3YHR148W 552 nt4.84□□□□□ -1.63
SSM4P40318 IRC9YJL142C 393 nt4.84□□□□□ -1.63
SSM4P40318 IMP2YMR035W 534 nt4.84□□□□□ -1.63
SSM4P40318 DDI3YNL335W 678 nt4.84□□□□□ -1.63
SSM4P40318 YOR296WYOR296W 3870 nt4.84□□□□□ -1.63
SSM4P40318 YTM1YOR272W 1383 nt4.84□□□□□ -1.64
SSM4P40318 NTH1YDR001C 2256 nt4.83□□□□□ -1.64
SSM4P40318 ALR2YFL050C 2577 nt4.83□□□□□ -1.64
SSM4P40318 snR78snR78 87 nt4.83□□□□□ -1.64
SSM4P40318 NUS1YDL193W 1128 nt4.83□□□□□ -1.64
SSM4P40318 YDR290WYDR290W 330 nt4.83□□□□□ -1.64
SSM4P40318 SAE3YHR079C-A 276 nt4.83□□□□□ -1.64
SSM4P40318 REE1YJL217W 597 nt4.83□□□□□ -1.64
SSM4P40318 ENT3YJR125C 1227 nt4.83□□□□□ -1.64
SSM4P40318 CTL1YMR180C 963 nt4.83□□□□□ -1.64
SSM4P40318 GOT1YMR292W 417 nt4.83□□□□□ -1.64
SSM4P40318 BCP1YDR361C 852 nt4.82□□□□□ -1.64
SSM4P40318 EBP2YKL172W 1284 nt4.82□□□□□ -1.64
SSM4P40318 TPM1YNL079C 600 nt4.82□□□□□ -1.64
SSM4P40318 MDM12YOL009C 816 nt4.82□□□□□ -1.64
SSM4P40318 SPT23YKL020C 3249 nt4.82□□□□□ -1.64
SSM4P40318 THR4YCR053W 1545 nt4.82□□□□□ -1.64
SSM4P40318 SMF1YOL122C 1728 nt4.82□□□□□ -1.64
SSM4P40318 ORC6YHR118C 1308 nt4.81□□□□□ -1.64
SSM4P40318 TRP4YDR354W 1143 nt4.81□□□□□ -1.64
SSM4P40318 ERJ5YFR041C 888 nt4.81□□□□□ -1.64
SSM4P40318 YAE1YJR067C 426 nt4.81□□□□□ -1.64
SSM4P40318 ORM2YLR350W 651 nt4.81□□□□□ -1.64
SSM4P40318 RNA1YMR235C 1224 nt4.81□□□□□ -1.64
SSM4P40318 CDC9YDL164C 2268 nt4.81□□□□□ -1.64
SSM4P40318 OAF1YAL051W 3144 nt4.81□□□□□ -1.64
SSM4P40318 DTD1YDL219W 453 nt4.8□□□□□ -1.64
SSM4P40318 YLL047WYLL047W 384 nt4.8□□□□□ -1.64
SSM4P40318 IDP2YLR174W 1239 nt4.8□□□□□ -1.64
SSM4P40318 TEX1YNL253W 1269 nt4.8□□□□□ -1.64
SSM4P40318 CEX1YOR112W 2286 nt4.8□□□□□ -1.64
SSM4P40318 STP4YDL048C 1473 nt4.8□□□□□ -1.64
SSM4P40318 POL31YJR006W 1464 nt4.8□□□□□ -1.64
SSM4P40318 SBE2YDR351W 2595 nt4.8□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms