Protein–RNA interactions for Protein: P39904

VPS52, Vacuolar protein sorting-associated protein 52, yeastyeast

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS52P39904 GPN3YLR243W 819 nt3.85□□□□□ -1.79
VPS52P39904 SEC72YLR292C 582 nt3.85□□□□□ -1.79
VPS52P39904 YOL107WYOL107W 1029 nt3.85□□□□□ -1.79
VPS52P39904 PLP2YOR281C 861 nt3.85□□□□□ -1.79
VPS52P39904 YOR338WYOR338W 1092 nt3.85□□□□□ -1.79
VPS52P39904 YBR292CYBR292C 372 nt3.85□□□□□ -1.79
VPS52P39904 TRM11YOL124C 1302 nt3.85□□□□□ -1.79
VPS52P39904 FAR10YLR238W 1437 nt3.85□□□□□ -1.79
VPS52P39904 RAD1YPL022W 3303 nt3.85□□□□□ -1.79
VPS52P39904 LAS1YKR063C 1509 nt3.85□□□□□ -1.79
VPS52P39904 TAF12YDR145W 1620 nt3.84□□□□□ -1.79
VPS52P39904 FLC1YPL221W 2382 nt3.84□□□□□ -1.79
VPS52P39904 YCL076WYCL076W 744 nt3.84□□□□□ -1.79
VPS52P39904 DPB4YDR121W 591 nt3.84□□□□□ -1.79
VPS52P39904 BUD25YER014C-A 462 nt3.84□□□□□ -1.79
VPS52P39904 tQ(UUG)CtQ(UUG)C 72 nt3.84□□□□□ -1.79
VPS52P39904 tQ(UUG)D1tQ(UUG)D1 72 nt3.84□□□□□ -1.79
VPS52P39904 tQ(UUG)D2tQ(UUG)D2 72 nt3.84□□□□□ -1.79
VPS52P39904 tQ(UUG)D3tQ(UUG)D3 72 nt3.84□□□□□ -1.79
VPS52P39904 tQ(UUG)E1tQ(UUG)E1 72 nt3.84□□□□□ -1.79
VPS52P39904 tQ(UUG)HtQ(UUG)H 72 nt3.84□□□□□ -1.79
VPS52P39904 tQ(UUG)LtQ(UUG)L 72 nt3.84□□□□□ -1.79
VPS52P39904 PCL7YIL050W 858 nt3.84□□□□□ -1.79
VPS52P39904 ARC15YIL062C 465 nt3.84□□□□□ -1.79
VPS52P39904 YJR038CYJR038C 363 nt3.84□□□□□ -1.79
VPS52P39904 SMD3YLR147C 306 nt3.84□□□□□ -1.79
VPS52P39904 RIF2YLR453C 1188 nt3.84□□□□□ -1.79
VPS52P39904 RNA1YMR235C 1224 nt3.84□□□□□ -1.79
VPS52P39904 FYV6YNL133C 522 nt3.84□□□□□ -1.79
VPS52P39904 YOR034C-AYOR034C-A 243 nt3.84□□□□□ -1.79
VPS52P39904 DSS4YPR017C 432 nt3.84□□□□□ -1.79
VPS52P39904 HPR1YDR138W 2259 nt3.84□□□□□ -1.79
VPS52P39904 RPN4YDL020C 1596 nt3.84□□□□□ -1.8
VPS52P39904 CTK1YKL139W 1587 nt3.84□□□□□ -1.8
VPS52P39904 CDC9YDL164C 2268 nt3.83□□□□□ -1.8
VPS52P39904 RPL24AYGL031C 468 nt3.83□□□□□ -1.8
VPS52P39904 HTD2YHR067W 843 nt3.83□□□□□ -1.8
VPS52P39904 SAE3YHR079C-A 276 nt3.83□□□□□ -1.8
VPS52P39904 RAD27YKL113C 1149 nt3.83□□□□□ -1.8
VPS52P39904 YMR130WYMR130W 909 nt3.83□□□□□ -1.8
VPS52P39904 SNF8YPL002C 702 nt3.83□□□□□ -1.8
VPS52P39904 POC4YPL144W 447 nt3.83□□□□□ -1.8
VPS52P39904 snR189snR189 189 nt3.83□□□□□ -1.8
VPS52P39904 VPS69YPR087W 321 nt3.83□□□□□ -1.8
VPS52P39904 TAZ1YPR140W 1146 nt3.83□□□□□ -1.8
VPS52P39904 ALG1YBR110W 1350 nt3.83□□□□□ -1.8
VPS52P39904 FMP30YPL103C 1407 nt3.83□□□□□ -1.8
VPS52P39904 YSH1YLR277C 2340 nt3.83□□□□□ -1.8
VPS52P39904 OSH2YDL019C 3852 nt3.83□□□□□ -1.8
VPS52P39904 TEL1YBL088C 8364 nt3.82□□□□□ -1.8
VPS52P39904 OPT2YPR194C 2634 nt3.82□□□□□ -1.8
VPS52P39904 YKR015CYKR015C 1707 nt3.82□□□□□ -1.8
VPS52P39904 MCP2YLR253W 1710 nt3.82□□□□□ -1.8
VPS52P39904 MEK1YOR351C 1494 nt3.82□□□□□ -1.8
VPS52P39904 LPP1YDR503C 825 nt3.82□□□□□ -1.8
VPS52P39904 ISC10YER180C 804 nt3.82□□□□□ -1.8
VPS52P39904 RPL8AYHL033C 771 nt3.82□□□□□ -1.8
VPS52P39904 UTP11YKL099C 753 nt3.82□□□□□ -1.8
VPS52P39904 CMC1YKL137W 336 nt3.82□□□□□ -1.8
VPS52P39904 RDN5-1RDN5-1 121 nt3.82□□□□□ -1.8
VPS52P39904 MAP1YLR244C 1164 nt3.82□□□□□ -1.8
VPS52P39904 DCS1YLR270W 1053 nt3.82□□□□□ -1.8
VPS52P39904 RDN5-6RDN5-6 121 nt3.82□□□□□ -1.8
VPS52P39904 GSP1YLR293C 660 nt3.82□□□□□ -1.8
VPS52P39904 ATG34YOL083W 1239 nt3.82□□□□□ -1.8
VPS52P39904 UFE1YOR075W 1041 nt3.82□□□□□ -1.8
VPS52P39904 YOR131CYOR131C 657 nt3.82□□□□□ -1.8
VPS52P39904 YPR059CYPR059C 387 nt3.82□□□□□ -1.8
VPS52P39904 HMG1YML075C 3165 nt3.81□□□□□ -1.8
VPS52P39904 SAT4YCR008W 1812 nt3.81□□□□□ -1.8
VPS52P39904 GZF3YJL110C 1656 nt3.81□□□□□ -1.8
VPS52P39904 MRP4YHL004W 1185 nt3.81□□□□□ -1.8
VPS52P39904 POP3YNL282W 588 nt3.81□□□□□ -1.8
VPS52P39904 IPP1YBR011C 864 nt3.81□□□□□ -1.8
VPS52P39904 UAF30YOR295W 687 nt3.81□□□□□ -1.8
VPS52P39904 SFG1YOR315W 1041 nt3.81□□□□□ -1.8
VPS52P39904 ICS2YBR157C 768 nt3.81□□□□□ -1.8
VPS52P39904 RDH54YBR073W 2877 nt3.81□□□□□ -1.8
VPS52P39904 YJR061WYJR061W 2808 nt3.81□□□□□ -1.8
VPS52P39904 VID28YIL017C 2766 nt3.8□□□□□ -1.8
VPS52P39904 RSC58YLR033W 1509 nt3.8□□□□□ -1.8
VPS52P39904 VPS73YGL104C 1461 nt3.8□□□□□ -1.8
VPS52P39904 GWT1YJL091C 1473 nt3.8□□□□□ -1.8
VPS52P39904 NHX1YDR456W 1902 nt3.8□□□□□ -1.8
VPS52P39904 GLN4YOR168W 2430 nt3.8□□□□□ -1.8
VPS52P39904 SAD1YFR005C 1347 nt3.8□□□□□ -1.8
VPS52P39904 KTR6YPL053C 1341 nt3.8□□□□□ -1.8
VPS52P39904 YDL228CYDL228C 642 nt3.8□□□□□ -1.8
VPS52P39904 THI13YDL244W 1023 nt3.8□□□□□ -1.8
VPS52P39904 BIO2YGR286C 1128 nt3.8□□□□□ -1.8
VPS52P39904 THI11YJR156C 1023 nt3.8□□□□□ -1.8
VPS52P39904 BOS1YLR078C 735 nt3.8□□□□□ -1.8
VPS52P39904 YNL303WYNL303W 348 nt3.8□□□□□ -1.8
VPS52P39904 IRC13YOR235W 315 nt3.8□□□□□ -1.8
VPS52P39904 PBN1YCL052C 1251 nt3.8□□□□□ -1.8
VPS52P39904 HCM1YCR065W 1695 nt3.8□□□□□ -1.8
VPS52P39904 HOS3YPL116W 2094 nt3.8□□□□□ -1.8
VPS52P39904 RIA1YNL163C 3333 nt3.8□□□□□ -1.8
VPS52P39904 NUP133YKR082W 3474 nt3.79□□□□□ -1.8
VPS52P39904 RPS11AYDR025W 471 nt3.79□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 29.4 ms