Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.83■■□□□ 1.09
LSP1P33241 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.83■■□□□ 1.09
LSP1P33241 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LSP1P33241 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
LSP1P33241 RPS2P7-201ENST00000447334 885 ntBASIC21.83■■□□□ 1.09
LSP1P33241 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.83■■□□□ 1.09
LSP1P33241 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.83■■□□□ 1.09
LSP1P33241 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
LSP1P33241 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
LSP1P33241 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.82■■□□□ 1.08
LSP1P33241 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LSP1P33241 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LSP1P33241 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LSP1P33241 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
LSP1P33241 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
LSP1P33241 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
LSP1P33241 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LSP1P33241 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.82■■□□□ 1.08
LSP1P33241 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LSP1P33241 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LSP1P33241 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LSP1P33241 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LSP1P33241 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
LSP1P33241 FEM1AP1-201ENST00000431297 1995 ntBASIC21.81■■□□□ 1.08
LSP1P33241 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSP1P33241 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
LSP1P33241 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
LSP1P33241 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.81■■□□□ 1.08
LSP1P33241 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LSP1P33241 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
LSP1P33241 MIR4449-201ENST00000578365 66 ntBASIC21.81■■□□□ 1.08
LSP1P33241 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
LSP1P33241 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSP1P33241 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSP1P33241 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.81■■□□□ 1.08
LSP1P33241 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LSP1P33241 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSP1P33241 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSP1P33241 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.81■■□□□ 1.08
LSP1P33241 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
LSP1P33241 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.81■■□□□ 1.08
LSP1P33241 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.8■■□□□ 1.08
LSP1P33241 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.8■■□□□ 1.08
LSP1P33241 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LSP1P33241 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSP1P33241 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSP1P33241 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.8■■□□□ 1.08
LSP1P33241 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.8■■□□□ 1.08
LSP1P33241 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
LSP1P33241 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSP1P33241 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSP1P33241 LINC01960-201ENST00000563759 1884 ntBASIC21.8■■□□□ 1.08
LSP1P33241 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LSP1P33241 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.8■■□□□ 1.08
LSP1P33241 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSP1P33241 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LSP1P33241 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.8■■□□□ 1.08
LSP1P33241 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
LSP1P33241 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.8■■□□□ 1.08
LSP1P33241 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.8■■□□□ 1.08
LSP1P33241 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.8■■□□□ 1.08
LSP1P33241 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LSP1P33241 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSP1P33241 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LSP1P33241 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LSP1P33241 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSP1P33241 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSP1P33241 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LSP1P33241 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSP1P33241 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.79■■□□□ 1.08
LSP1P33241 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSP1P33241 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LSP1P33241 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LSP1P33241 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.79■■□□□ 1.08
LSP1P33241 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.79■■□□□ 1.08
LSP1P33241 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSP1P33241 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LSP1P33241 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.78■■□□□ 1.08
LSP1P33241 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.78■■□□□ 1.08
LSP1P33241 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21.78■■□□□ 1.08
LSP1P33241 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.78■■□□□ 1.08
LSP1P33241 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.78■■□□□ 1.08
LSP1P33241 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LSP1P33241 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms