Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC010141.3-201ENST00000456659 717 ntBASIC29.12■■■□□ 2.25
RXRBP28702 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
RXRBP28702 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC29.12■■■□□ 2.25
RXRBP28702 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
RXRBP28702 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC29.11■■■□□ 2.25
RXRBP28702 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
RXRBP28702 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
RXRBP28702 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC29.11■■■□□ 2.25
RXRBP28702 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
RXRBP28702 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
RXRBP28702 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RXRBP28702 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RXRBP28702 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
RXRBP28702 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC29.11■■■□□ 2.25
RXRBP28702 UQCRFS1P1-201ENST00000435169 820 ntBASIC29.11■■■□□ 2.25
RXRBP28702 AP003097.1-201ENST00000530657 1135 ntBASIC29.11■■■□□ 2.25
RXRBP28702 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC29.11■■■□□ 2.25
RXRBP28702 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
RXRBP28702 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
RXRBP28702 AC091874.3-201ENST00000512672 1195 ntBASIC29.1■■■□□ 2.25
RXRBP28702 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC29.1■■■□□ 2.25
RXRBP28702 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
RXRBP28702 EI24-211ENST00000534546 1544 ntTSL 2 BASIC29.1■■■□□ 2.25
RXRBP28702 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC29.09■■■□□ 2.25
RXRBP28702 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
RXRBP28702 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC29.09■■■□□ 2.25
RXRBP28702 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
RXRBP28702 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC29.09■■■□□ 2.25
RXRBP28702 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
RXRBP28702 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
RXRBP28702 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC29.09■■■□□ 2.25
RXRBP28702 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC29.09■■■□□ 2.25
RXRBP28702 TERF1P5-201ENST00000477545 1207 ntBASIC29.09■■■□□ 2.25
RXRBP28702 Z99916.2-201ENST00000604037 246 ntBASIC29.09■■■□□ 2.25
RXRBP28702 AC016405.3-201ENST00000607710 860 ntBASIC29.09■■■□□ 2.25
RXRBP28702 AC008694.1-202ENST00000636953 945 ntBASIC29.09■■■□□ 2.25
RXRBP28702 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC29.09■■■□□ 2.25
RXRBP28702 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC29.09■■■□□ 2.25
RXRBP28702 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
RXRBP28702 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC29.08■■■□□ 2.25
RXRBP28702 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC29.08■■■□□ 2.25
RXRBP28702 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RXRBP28702 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RXRBP28702 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
RXRBP28702 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC29.08■■■□□ 2.25
RXRBP28702 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC29.08■■■□□ 2.25
RXRBP28702 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
RXRBP28702 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC29.08■■■□□ 2.25
RXRBP28702 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC29.08■■■□□ 2.25
RXRBP28702 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
RXRBP28702 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
RXRBP28702 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC29.07■■■□□ 2.24
RXRBP28702 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC29.07■■■□□ 2.24
RXRBP28702 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
RXRBP28702 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC29.07■■■□□ 2.24
RXRBP28702 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC29.07■■■□□ 2.24
RXRBP28702 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC29.07■■■□□ 2.24
RXRBP28702 AL445228.2-201ENST00000605589 952 ntBASIC29.07■■■□□ 2.24
RXRBP28702 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC29.07■■■□□ 2.24
RXRBP28702 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
RXRBP28702 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC29.06■■■□□ 2.24
RXRBP28702 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC29.06■■■□□ 2.24
RXRBP28702 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC29.06■■■□□ 2.24
RXRBP28702 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC29.06■■■□□ 2.24
RXRBP28702 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC29.06■■■□□ 2.24
RXRBP28702 SERP1-208ENST00000491660 830 ntTSL 2 BASIC29.06■■■□□ 2.24
RXRBP28702 KRT18P20-201ENST00000548986 1279 ntBASIC29.06■■■□□ 2.24
RXRBP28702 TK2-213ENST00000563369 882 ntTSL 5 BASIC29.06■■■□□ 2.24
RXRBP28702 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
RXRBP28702 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
RXRBP28702 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC29.05■■■□□ 2.24
RXRBP28702 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
RXRBP28702 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC29.05■■■□□ 2.24
RXRBP28702 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
RXRBP28702 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
RXRBP28702 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC29.05■■■□□ 2.24
RXRBP28702 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC29.05■■■□□ 2.24
RXRBP28702 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC29.05■■■□□ 2.24
RXRBP28702 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC29.05■■■□□ 2.24
RXRBP28702 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC29.05■■■□□ 2.24
RXRBP28702 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
RXRBP28702 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC29.04■■■□□ 2.24
RXRBP28702 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC29.04■■■□□ 2.24
RXRBP28702 BX088651.1-201ENST00000540551 451 ntBASIC29.04■■■□□ 2.24
RXRBP28702 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
RXRBP28702 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC29.04■■■□□ 2.24
RXRBP28702 AC069236.1-201ENST00000604339 616 ntBASIC29.04■■■□□ 2.24
RXRBP28702 FAM197Y4-202ENST00000622692 608 ntBASIC29.04■■■□□ 2.24
RXRBP28702 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC29.04■■■□□ 2.24
RXRBP28702 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC29.03■■■□□ 2.24
RXRBP28702 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RXRBP28702 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RXRBP28702 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RXRBP28702 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
RXRBP28702 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC29.03■■■□□ 2.24
RXRBP28702 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC29.03■■■□□ 2.24
RXRBP28702 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC29.03■■■□□ 2.24
RXRBP28702 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC29.03■■■□□ 2.24
RXRBP28702 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC29.03■■■□□ 2.24
RXRBP28702 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC29.03■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms