Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.79■■□□□ 1.08
VCLP18206 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VCLP18206 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.79■■□□□ 1.08
VCLP18206 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
VCLP18206 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.79■■□□□ 1.08
VCLP18206 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VCLP18206 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VCLP18206 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VCLP18206 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VCLP18206 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
VCLP18206 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.78■■□□□ 1.08
VCLP18206 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
VCLP18206 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
VCLP18206 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.78■■□□□ 1.08
VCLP18206 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VCLP18206 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
VCLP18206 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VCLP18206 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
VCLP18206 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
VCLP18206 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VCLP18206 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.77■■□□□ 1.08
VCLP18206 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VCLP18206 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VCLP18206 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
VCLP18206 BX842568.3-201ENST00000418104 571 ntBASIC21.77■■□□□ 1.08
VCLP18206 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
VCLP18206 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.77■■□□□ 1.08
VCLP18206 AC091305.1-201ENST00000479476 895 ntBASIC21.77■■□□□ 1.08
VCLP18206 AP001330.3-201ENST00000520123 633 ntBASIC21.77■■□□□ 1.08
VCLP18206 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.77■■□□□ 1.08
VCLP18206 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
VCLP18206 AF213884.3-201ENST00000563833 479 ntBASIC21.77■■□□□ 1.08
VCLP18206 AL031432.3-201ENST00000607698 485 ntBASIC21.77■■□□□ 1.08
VCLP18206 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.77■■□□□ 1.08
VCLP18206 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
VCLP18206 SLC25A24-204ENST00000569674 2357 ntBASIC21.77■■□□□ 1.08
VCLP18206 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
VCLP18206 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.77■■□□□ 1.08
VCLP18206 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
VCLP18206 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
VCLP18206 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
VCLP18206 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
VCLP18206 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VCLP18206 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
VCLP18206 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
VCLP18206 SUDS3P1-201ENST00000505831 966 ntBASIC21.76■■□□□ 1.07
VCLP18206 AC233992.3-201ENST00000607491 485 ntBASIC21.76■■□□□ 1.07
VCLP18206 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
VCLP18206 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.76■■□□□ 1.07
VCLP18206 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.75■■□□□ 1.07
VCLP18206 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VCLP18206 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VCLP18206 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.75■■□□□ 1.07
VCLP18206 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
VCLP18206 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VCLP18206 MIR939-201ENST00000401314 82 ntBASIC21.75■■□□□ 1.07
VCLP18206 AC008764.7-201ENST00000593779 1081 ntBASIC21.75■■□□□ 1.07
VCLP18206 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VCLP18206 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VCLP18206 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
VCLP18206 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
VCLP18206 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VCLP18206 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VCLP18206 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.74■■□□□ 1.07
VCLP18206 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
VCLP18206 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.74■■□□□ 1.07
VCLP18206 GUSBP5-202ENST00000510805 1989 ntBASIC21.74■■□□□ 1.07
VCLP18206 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
VCLP18206 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.74■■□□□ 1.07
VCLP18206 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VCLP18206 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.74■■□□□ 1.07
VCLP18206 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VCLP18206 AL136967.2-201ENST00000623968 743 ntBASIC21.74■■□□□ 1.07
VCLP18206 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
VCLP18206 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
VCLP18206 RASA4CP-201ENST00000424092 1398 ntBASIC21.74■■□□□ 1.07
VCLP18206 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
VCLP18206 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.73■■□□□ 1.07
VCLP18206 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.73■■□□□ 1.07
VCLP18206 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
VCLP18206 OR2I1P-207ENST00000453522 948 ntBASIC21.73■■□□□ 1.07
VCLP18206 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VCLP18206 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.73■■□□□ 1.07
VCLP18206 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.73■■□□□ 1.07
VCLP18206 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VCLP18206 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VCLP18206 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
VCLP18206 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VCLP18206 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
VCLP18206 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
VCLP18206 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCLP18206 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
VCLP18206 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.72■■□□□ 1.07
VCLP18206 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.72■■□□□ 1.07
VCLP18206 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.72■■□□□ 1.07
VCLP18206 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
VCLP18206 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
VCLP18206 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
VCLP18206 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
VCLP18206 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms