Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.48■□□□□ 0.71
HLA-DPB1P04440 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.47■□□□□ 0.71
HLA-DPB1P04440 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
HLA-DPB1P04440 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.46■□□□□ 0.71
HLA-DPB1P04440 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 MTDHP2-201ENST00000601468 714 ntBASIC19.45■□□□□ 0.7
HLA-DPB1P04440 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HLA-DPB1P04440 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HLA-DPB1P04440 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 GUSBP5-201ENST00000418136 578 ntBASIC19.43■□□□□ 0.7
HLA-DPB1P04440 UNC93B8-201ENST00000511903 705 ntBASIC19.43■□□□□ 0.7
HLA-DPB1P04440 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
HLA-DPB1P04440 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPB1P04440 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
HLA-DPB1P04440 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.42■□□□□ 0.7
HLA-DPB1P04440 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.42■□□□□ 0.7
HLA-DPB1P04440 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HLA-DPB1P04440 AC010997.5-201ENST00000609182 354 ntBASIC19.42■□□□□ 0.7
HLA-DPB1P04440 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms