Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
GAPDHP04406 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAPDHP04406 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAPDHP04406 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GAPDHP04406 LINC01529-204ENST00000636474 1715 ntBASIC18.12■□□□□ 0.49
GAPDHP04406 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAPDHP04406 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
GAPDHP04406 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
GAPDHP04406 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
GAPDHP04406 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAPDHP04406 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.11■□□□□ 0.49
GAPDHP04406 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
GAPDHP04406 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAPDHP04406 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.11■□□□□ 0.49
GAPDHP04406 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.11■□□□□ 0.49
GAPDHP04406 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.11■□□□□ 0.49
GAPDHP04406 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAPDHP04406 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GAPDHP04406 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAPDHP04406 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAPDHP04406 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
GAPDHP04406 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAPDHP04406 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GAPDHP04406 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAPDHP04406 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
GAPDHP04406 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
GAPDHP04406 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.11■□□□□ 0.49
GAPDHP04406 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.11■□□□□ 0.49
GAPDHP04406 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
GAPDHP04406 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
GAPDHP04406 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAPDHP04406 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
GAPDHP04406 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAPDHP04406 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.1■□□□□ 0.49
GAPDHP04406 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.1■□□□□ 0.49
GAPDHP04406 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
GAPDHP04406 AL353803.4-201ENST00000565882 1934 ntBASIC18.1■□□□□ 0.49
GAPDHP04406 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAPDHP04406 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
GAPDHP04406 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.1■□□□□ 0.49
GAPDHP04406 C17orf82-201ENST00000623772 1530 ntBASIC18.1■□□□□ 0.49
GAPDHP04406 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.1■□□□□ 0.49
GAPDHP04406 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.1■□□□□ 0.49
GAPDHP04406 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAPDHP04406 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAPDHP04406 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAPDHP04406 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
GAPDHP04406 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GAPDHP04406 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GAPDHP04406 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
GAPDHP04406 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
GAPDHP04406 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GAPDHP04406 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GAPDHP04406 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.09■□□□□ 0.49
GAPDHP04406 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GAPDHP04406 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GAPDHP04406 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.09■□□□□ 0.49
GAPDHP04406 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
GAPDHP04406 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
GAPDHP04406 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
GAPDHP04406 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.09■□□□□ 0.49
GAPDHP04406 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.09■□□□□ 0.49
GAPDHP04406 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.09■□□□□ 0.49
GAPDHP04406 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
GAPDHP04406 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
GAPDHP04406 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.08■□□□□ 0.49
GAPDHP04406 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
GAPDHP04406 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
GAPDHP04406 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
GAPDHP04406 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
GAPDHP04406 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
GAPDHP04406 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.08■□□□□ 0.48
GAPDHP04406 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GAPDHP04406 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.08■□□□□ 0.48
GAPDHP04406 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.08■□□□□ 0.48
GAPDHP04406 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.08■□□□□ 0.48
GAPDHP04406 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.08■□□□□ 0.48
GAPDHP04406 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.08■□□□□ 0.48
GAPDHP04406 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
GAPDHP04406 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
GAPDHP04406 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
GAPDHP04406 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GAPDHP04406 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.07■□□□□ 0.48
GAPDHP04406 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GAPDHP04406 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAPDHP04406 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAPDHP04406 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAPDHP04406 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
GAPDHP04406 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.07■□□□□ 0.48
GAPDHP04406 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
GAPDHP04406 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.07■□□□□ 0.48
GAPDHP04406 DUX4L4-201ENST00000566884 1269 ntBASIC18.07■□□□□ 0.48
GAPDHP04406 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
GAPDHP04406 AC241377.3-202ENST00000626088 1088 ntBASIC18.07■□□□□ 0.48
GAPDHP04406 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.07■□□□□ 0.48
GAPDHP04406 AC241585.3-202ENST00000628937 1088 ntBASIC18.07■□□□□ 0.48
GAPDHP04406 AC245100.8-202ENST00000629247 1058 ntBASIC18.07■□□□□ 0.48
GAPDHP04406 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.07■□□□□ 0.48
GAPDHP04406 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.07■□□□□ 0.48
GAPDHP04406 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms