Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV3P03979 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV3P03979 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRGV3P03979 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
TRGV3P03979 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRGV3P03979 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV3P03979 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRGV3P03979 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV3P03979 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV3P03979 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV3P03979 MIR638-201ENST00000385237 100 ntBASIC17.07■□□□□ 0.32
TRGV3P03979 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.07■□□□□ 0.32
TRGV3P03979 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.07■□□□□ 0.32
TRGV3P03979 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV3P03979 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.07■□□□□ 0.32
TRGV3P03979 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV3P03979 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TRGV3P03979 AC079834.2-201ENST00000609776 1949 ntBASIC17.07■□□□□ 0.32
TRGV3P03979 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRGV3P03979 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRGV3P03979 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRGV3P03979 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRGV3P03979 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.06■□□□□ 0.32
TRGV3P03979 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRGV3P03979 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV3P03979 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV3P03979 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
TRGV3P03979 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.06■□□□□ 0.32
TRGV3P03979 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRGV3P03979 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV3P03979 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TRGV3P03979 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.06■□□□□ 0.32
TRGV3P03979 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.06■□□□□ 0.32
TRGV3P03979 AC091305.1-201ENST00000479476 895 ntBASIC17.06■□□□□ 0.32
TRGV3P03979 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV3P03979 AL031602.1-201ENST00000633169 911 ntBASIC17.06■□□□□ 0.32
TRGV3P03979 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV3P03979 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV3P03979 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV3P03979 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.06■□□□□ 0.32
TRGV3P03979 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV3P03979 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV3P03979 ESRRAP2-201ENST00000418437 1549 ntBASIC17.06■□□□□ 0.32
TRGV3P03979 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV3P03979 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRGV3P03979 RASA4CP-201ENST00000424092 1398 ntBASIC17.05■□□□□ 0.32
TRGV3P03979 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
TRGV3P03979 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRGV3P03979 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV3P03979 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.05■□□□□ 0.32
TRGV3P03979 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.05■□□□□ 0.32
TRGV3P03979 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV3P03979 MIR939-201ENST00000401314 82 ntBASIC17.05■□□□□ 0.32
TRGV3P03979 AP005435.1-201ENST00000529293 1178 ntBASIC17.05■□□□□ 0.32
TRGV3P03979 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.05■□□□□ 0.32
TRGV3P03979 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.05■□□□□ 0.32
TRGV3P03979 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV3P03979 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV3P03979 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV3P03979 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV3P03979 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRGV3P03979 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
TRGV3P03979 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV3P03979 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV3P03979 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV3P03979 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV3P03979 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV3P03979 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.04■□□□□ 0.32
TRGV3P03979 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.04■□□□□ 0.32
TRGV3P03979 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC17.04■□□□□ 0.32
TRGV3P03979 AL031432.3-201ENST00000607698 485 ntBASIC17.04■□□□□ 0.32
TRGV3P03979 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
TRGV3P03979 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV3P03979 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV3P03979 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV3P03979 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV3P03979 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV3P03979 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV3P03979 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.03■□□□□ 0.32
TRGV3P03979 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV3P03979 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV3P03979 SUDS3P1-201ENST00000505831 966 ntBASIC17.03■□□□□ 0.32
TRGV3P03979 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.03■□□□□ 0.32
TRGV3P03979 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRGV3P03979 CA15P2-201ENST00000611168 834 ntBASIC17.03■□□□□ 0.32
TRGV3P03979 AL136967.2-201ENST00000623968 743 ntBASIC17.03■□□□□ 0.32
TRGV3P03979 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.03■□□□□ 0.32
TRGV3P03979 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRGV3P03979 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV3P03979 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV3P03979 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV3P03979 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRGV3P03979 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV3P03979 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TRGV3P03979 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
TRGV3P03979 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV3P03979 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
TRGV3P03979 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.02■□□□□ 0.32
TRGV3P03979 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRGV3P03979 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms