Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 LETM1P2-201ENST00000597330 2178 ntBASIC17.56■□□□□ 0.4
APOC3P02656 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOC3P02656 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
APOC3P02656 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOC3P02656 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
APOC3P02656 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
APOC3P02656 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC17.56■□□□□ 0.4
APOC3P02656 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOC3P02656 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
APOC3P02656 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
APOC3P02656 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.55■□□□□ 0.4
APOC3P02656 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
APOC3P02656 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.55■□□□□ 0.4
APOC3P02656 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
APOC3P02656 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.55■□□□□ 0.4
APOC3P02656 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
APOC3P02656 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
APOC3P02656 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
APOC3P02656 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
APOC3P02656 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOC3P02656 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.54■□□□□ 0.4
APOC3P02656 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.54■□□□□ 0.4
APOC3P02656 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOC3P02656 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
APOC3P02656 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.54■□□□□ 0.4
APOC3P02656 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.54■□□□□ 0.4
APOC3P02656 AFG3L1P-217ENST00000557444 2447 ntBASIC17.54■□□□□ 0.4
APOC3P02656 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.54■□□□□ 0.4
APOC3P02656 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
APOC3P02656 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
APOC3P02656 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOC3P02656 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOC3P02656 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
APOC3P02656 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.54■□□□□ 0.4
APOC3P02656 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.53■□□□□ 0.4
APOC3P02656 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
APOC3P02656 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
APOC3P02656 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
APOC3P02656 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
APOC3P02656 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
APOC3P02656 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.53■□□□□ 0.4
APOC3P02656 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.53■□□□□ 0.4
APOC3P02656 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
APOC3P02656 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.52■□□□□ 0.4
APOC3P02656 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APOC3P02656 AC244015.2-201ENST00000616358 1861 ntBASIC17.52■□□□□ 0.4
APOC3P02656 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOC3P02656 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOC3P02656 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
APOC3P02656 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
APOC3P02656 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
APOC3P02656 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
APOC3P02656 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
APOC3P02656 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
APOC3P02656 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
APOC3P02656 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
APOC3P02656 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.52■□□□□ 0.39
APOC3P02656 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APOC3P02656 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
APOC3P02656 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
APOC3P02656 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.51■□□□□ 0.39
APOC3P02656 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOC3P02656 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APOC3P02656 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
APOC3P02656 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOC3P02656 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
APOC3P02656 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOC3P02656 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.51■□□□□ 0.39
APOC3P02656 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
APOC3P02656 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms