Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.34■□□□□ 0.21
HLA-DQA1P01909 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQA1P01909 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQA1P01909 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HLA-DQA1P01909 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
HLA-DQA1P01909 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HLA-DQA1P01909 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 AC025884.2-201ENST00000553429 711 ntBASIC16.33■□□□□ 0.2
HLA-DQA1P01909 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 AC090877.2-201ENST00000558441 1738 ntBASIC16.33■□□□□ 0.2
HLA-DQA1P01909 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HLA-DQA1P01909 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HLA-DQA1P01909 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DQA1P01909 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 GPX1-201ENST00000419349 1106 ntBASIC16.3■□□□□ 0.2
HLA-DQA1P01909 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DQA1P01909 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 MOB2-207ENST00000614710 705 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DQA1P01909 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms